RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 INVSQ9Y283 1065 aa5.19□□□□□ -1.58
CDC27-213ENST00000571643 ZNF536O15090 1300 aa5.19□□□□□ -1.58
CDC27-213ENST00000571643 RIMBP3CA6NJZ7 1639 aa5.19□□□□□ -1.58
CDC27-213ENST00000571643 RIMBP3BA6NNM3 1639 aa5.19□□□□□ -1.58
CDC27-213ENST00000571643 SHROOM2Q13796 1616 aa5.19□□□□□ -1.58
CDC27-213ENST00000571643 RIMBP3Q9UFD9 1639 aa5.19□□□□□ -1.58
CDC27-213ENST00000571643 CCDC85CA6NKD9 419 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 EFCAB14O75071 495 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 HSP90B1P14625 803 aaKnown RBP5.18□□□□□ -1.58
CDC27-213ENST00000571643 MAGEA10P43363 369 aaPredicted RBP5.18□□□□□ -1.58
CDC27-213ENST00000571643 GRIN1Q05586 938 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 GPR19Q15760 415 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 TBC1D10BQ4KMP7 808 aaPredicted RBP5.18□□□□□ -1.58
CDC27-213ENST00000571643 FIGNQ5HY92 759 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 CD276Q5ZPR3 534 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 HHIPL2Q6UWX4 724 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 EP400NLQ6ZTU2 488 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 REXO1L1PQ8IX06 675 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 ZCCHC14Q8WYQ9 949 aaKnown RBP5.18□□□□□ -1.58
CDC27-213ENST00000571643 FBXW5Q969U6 566 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 DEPDC7Q96QD5 511 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 SMPD4Q9NXE4 827 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 PFDN2Q9UHV9 154 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 RAPGEF2Q9Y4G8 1499 aa5.18□□□□□ -1.58
CDC27-213ENST00000571643 CEP170Q5SW79 1584 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 CCDC163A0A0D9SF12 145 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 BLACEA4D250 179 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 COL6A2P12110 1019 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 MLLT6P55198 1093 aaPredicted RBP5.17□□□□□ -1.58
CDC27-213ENST00000571643 ST5P78524 1137 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 SERINC3Q13530 473 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 RASA3Q14644 834 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 SKIDA1Q1XH10 827 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 ARHGEF18Q6ZSZ5 1173 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 PROSER1Q86XN7 944 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 CLEC4DQ8WXI8 215 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 MKL1Q969V6 931 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 RBM15Q96T37 977 aaKnown RBP eCLIP5.17□□□□□ -1.58
CDC27-213ENST00000571643 DHRS4Q9BTZ2 278 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 ARHGAP20Q9P2F6 1191 aa5.17□□□□□ -1.58
CDC27-213ENST00000571643 ZNF839A8K0R7 811 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 ARVCFO00192 962 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 NKRFO15226 690 aaKnown RBP eCLIP5.16□□□□□ -1.58
CDC27-213ENST00000571643 B4GALT3O60512 393 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 GUCY1A3Q02108 690 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 RBL2Q08999 1139 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 NFATC3Q12968 1075 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 ZNF568Q3ZCX4 644 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 DPP8Q6V1X1 898 aaPredicted RBP5.16□□□□□ -1.58
CDC27-213ENST00000571643 RALYLQ86SE5 291 aaKnown RBP5.16□□□□□ -1.58
CDC27-213ENST00000571643 IFNL2Q8IZJ0 200 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 CHST13Q8NET6 341 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 IGDCC4Q8TDY8 1250 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 MBD6Q96DN6 1003 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 LOXL4Q96JB6 756 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 GPR20Q99678 358 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 ZFP69BQ9UJL9 534 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 ADAM29Q9UKF5 820 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 SRPK3Q9UPE1 567 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 MYRFQ9Y2G1 1151 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 MRPS23Q9Y3D9 190 aaKnown RBP5.16□□□□□ -1.58
CDC27-213ENST00000571643 TRAF6Q9Y4K3 522 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 KDM2BQ8NHM5 1336 aa5.16□□□□□ -1.58
CDC27-213ENST00000571643 ASXL2Q76L83 1435 aa5.15□□□□□ -1.58
CDC27-213ENST00000571643 PRXQ9BXM0 1461 aa5.15□□□□□ -1.58
CDC27-213ENST00000571643 RUSC2Q8N2Y8 1516 aa5.15□□□□□ -1.58
CDC27-213ENST00000571643 CUTAO60888 179 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 C6orf222P0C671 652 aaPredicted RBP5.15□□□□□ -1.59
CDC27-213ENST00000571643 EPHB4P54760 987 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 ADAM17P78536 824 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 CRY1Q16526 586 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 SLFN13Q68D06 897 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 C16orf59Q7L2K0 433 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 KBTBD2Q8IY47 623 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 ZSWIM2Q8NEG5 633 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 KCND1Q9NSA2 647 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 CATSPERZQ9NTU4 200 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 SNTG2Q9NY99 539 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 ATP23Q9Y6H3 246 aa5.15□□□□□ -1.59
CDC27-213ENST00000571643 ARAP1Q96P48 1450 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 IQGAP2Q13576 1575 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 NPEPPSL1A6NEC2 478 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 H0Y858 1186 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 DIAPH1O60610 1272 aaKnown RBP5.14□□□□□ -1.59
CDC27-213ENST00000571643 KNG1P01042 644 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 LTFP02788 710 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 CKMP06732 381 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 COL6A1P12109 1028 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 PPP2CBP62714 309 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 PPP2CAP67775 309 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 PFKPQ01813 784 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 ZXDCQ2QGD7 858 aaPredicted RBP5.14□□□□□ -1.59
CDC27-213ENST00000571643 FAM209AQ5JX71 171 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 BTBD8Q5XKL5 378 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 CPZQ66K79 652 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 ARHGAP36Q6ZRI8 547 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 Q6ZUG5 572 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 GGNQ86UU5 652 aa5.14□□□□□ -1.59
CDC27-213ENST00000571643 CIR1Q86X95 450 aaPredicted RBP5.14□□□□□ -1.59
CDC27-213ENST00000571643 ZC3H7AQ8IWR0 971 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms