RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 STBD1O95210 358 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 MCM7P33993 719 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 PKP1Q13835 747 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 GPNMBQ14956 572 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 TRIM71Q2Q1W2 868 aaKnown RBP7.9□□□□□ -1.14
SMG6-209ENST00000571442 MARCH8Q5T0T0 291 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 LARP1BQ659C4 914 aaKnown RBP7.9□□□□□ -1.14
SMG6-209ENST00000571442 ZNF746Q6NUN9 644 aaPredicted RBP7.9□□□□□ -1.14
SMG6-209ENST00000571442 SWSAP1Q6NVH7 229 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 FAM173BQ6P4H8 233 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 RUFY4Q6ZNE9 571 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 FERMT3Q86UX7 667 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 C4orf32Q8N8J7 132 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 LMBR1Q8WVP7 490 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 INTS4Q96HW7 963 aaKnown RBP7.9□□□□□ -1.14
SMG6-209ENST00000571442 RIT2Q99578 217 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 GDF15Q99988 308 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 NOC4LQ9BVI4 516 aaKnown RBP7.9□□□□□ -1.14
SMG6-209ENST00000571442 TMEM39AQ9NV64 488 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 GABBR1Q9UBS5 961 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 MTMR6Q9Y217 621 aa7.9□□□□□ -1.14
SMG6-209ENST00000571442 MYH15Q9Y2K3 1946 aa7.9□□□□□ -1.15
SMG6-209ENST00000571442 MROH7Q68CQ1 1323 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 IGSF9BQ9UPX0 1349 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 A0A1W2PPC1 479 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 DCDC2CA8MYV0 355 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 ZBTB42B2RXF5 422 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 TIMP1P01033 207 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 INSRRP14616 1297 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 GCFC2P16383 781 aaKnown RBP7.89□□□□□ -1.15
SMG6-209ENST00000571442 SYT1P21579 422 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 STAT5BP51692 787 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 CCL23P55773 120 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 KRT76Q01546 638 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 PTPN11Q06124 597 aaPredicted RBP7.89□□□□□ -1.15
SMG6-209ENST00000571442 RESTQ13127 1097 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 PPP2R5CQ13362 524 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 SAFBQ15424 915 aaKnown RBP eCLIP7.89□□□□□ -1.15
SMG6-209ENST00000571442 IL17AQ16552 155 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 PTGISQ16647 500 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 TCTN1Q2MV58 587 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 TTC38Q5R3I4 469 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 MCTP1Q6DN14 999 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 C16orf59Q7L2K0 433 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 TRMT1LQ7Z2T5 733 aaKnown RBP7.89□□□□□ -1.15
SMG6-209ENST00000571442 HSCBQ8IWL3 235 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 C7orf31Q8N865 590 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 GLG1Q92896 1179 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 SCLYQ96I15 445 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 SH2D3AQ9BRG2 576 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 KATNAL1Q9BW62 490 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 TEKT3Q9BXF9 490 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 FTOQ9C0B1 505 aaKnown RBP eCLIP7.89□□□□□ -1.15
SMG6-209ENST00000571442 SMARCAD1Q9H4L7 1026 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 ZNF302Q9NR11 478 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 DISC1Q9NRI5 854 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 TBC1D22BQ9NU19 505 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 PCDHA10Q9Y5I2 948 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 MAFBQ9Y5Q3 323 aaPredicted RBP7.89□□□□□ -1.15
SMG6-209ENST00000571442 LOXHD1Q8IVV2 1947 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
SMG6-209ENST00000571442 ARID2Q68CP9 1835 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 A0A087WWV3 80 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 C17orf102A2RUQ5 167 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 VPS37CA5D8V6 355 aaPredicted RBP7.88□□□□□ -1.15
SMG6-209ENST00000571442 POTEMA6NI47 508 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 WDR64B1ANS9 1081 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 H3BQV1 296 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 BACH1O14867 736 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 ZBTB39O15060 712 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 TBX3O15119 743 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 TLR3O15455 904 aaKnown RBP7.88□□□□□ -1.15
SMG6-209ENST00000571442 NEMFO60524 1076 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 ACRP10323 421 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 CSF2RAP15509 400 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 RAG1P15918 1043 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 TXKP42681 527 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 IGBP1P78318 339 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 PPFIA1Q13136 1202 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 MBTPS1Q14703 1052 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 GRIK4Q16099 956 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 CALCRLQ16602 461 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 C9orf50Q5SZB4 431 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 MIS18BP1Q6P0N0 1132 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 PDXDC2PQ6P474 469 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 PLPPR4Q7Z2D5 763 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 MIER3Q7Z3K6 550 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 SERINC5Q86VE9 423 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 SMAP1Q8IYB5 467 aaPredicted RBP7.88□□□□□ -1.15
SMG6-209ENST00000571442 ZNF579Q8NAF0 562 aaKnown RBP7.88□□□□□ -1.15
SMG6-209ENST00000571442 BANK1Q8NDB2 785 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 FAM20AQ96MK3 541 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 CEP89Q96ST8 783 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 HIPK3Q9H422 1215 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.88□□□□□ -1.15
SMG6-209ENST00000571442 ERAP1Q9NZ08 941 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 RGL1Q9NZL6 768 aa7.88□□□□□ -1.15
SMG6-209ENST00000571442 PTPRSQ13332 1948 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms