RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 RPS6KA4O75676 772 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 UFL1O94874 794 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 CYP11B2P19099 503 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 ECHS1P30084 290 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 GPSM2P81274 684 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L24Q0WX57 530 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L6PQ6QN14 398 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 NEUROG2Q9H2A3 272 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 MYH4Q9Y623 1939 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 COL5A3P25940 1745 aaPredicted RBP19.12■□□□□ 0.65
SCARF1-205ENST00000571272 SART1O43290 800 aaKnown RBP19.12■□□□□ 0.65
SCARF1-205ENST00000571272 MYBP10242 640 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 MARSP56192 900 aaKnown RBP19.12■□□□□ 0.65
SCARF1-205ENST00000571272 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 KCTD1Q719H9 257 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 PSTPIP2Q9H939 334 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 TMBIM4Q9HC24 238 aa19.12■□□□□ 0.65
SCARF1-205ENST00000571272 POTEFA5A3E0 1075 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 USP17L10C9JJH3 530 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 RAD21O60216 631 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 POTEIP0CG38 1075 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 UCHL3P15374 230 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 NOVP48745 357 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 USP11P51784 963 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 IFT88Q13099 833 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 UAP1Q16222 522 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 ALKBH5Q6P6C2 394 aaKnown RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 POTEGQ6S5H5 508 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 POTEEQ6S8J3 1075 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 NAGPAQ9UK23 515 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 GCOM1H8Y6P7 765 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 MYZAPP0CAP1 466 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 PLCG2P16885 1265 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 CTNNA1P35221 906 aaKnown RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 FLT3P36888 993 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 CLK2P49760 499 aaKnown RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 MRPL12P52815 198 aaKnown RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 ARSHQ5FYA8 562 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 DCAF17Q5H9S7 520 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 METTL13Q8N6R0 699 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 ARHGEF1Q92888 912 aaKnown RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 KDM3AQ9Y4C1 1321 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 MED24O75448 989 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 ITGA4P13612 1032 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 ZNF543Q08ER8 600 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 TCERG1LQ5VWI1 586 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 RBM46Q8TBY0 533 aaKnown RBP19.11■□□□□ 0.65
SCARF1-205ENST00000571272 SCFD2Q8WU76 684 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 PLCB1Q9NQ66 1216 aa19.11■□□□□ 0.65
SCARF1-205ENST00000571272 SPATA31A5Q5VU36 1347 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 SPATA31A7Q8IWB4 1347 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 MEIS1O00470 390 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 FNTAP49354 379 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 EMC10Q5UCC4 262 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 UBLCP1Q8WVY7 318 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-205ENST00000571272 ARMCX3Q9UH62 379 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-205ENST00000571272 AMACRQ9UHK6 382 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 NOC2LQ9Y3T9 749 aaKnown RBP19.1■□□□□ 0.65
SCARF1-205ENST00000571272 MYH7BA7E2Y1 1941 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 SLURP2P0DP57 97 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 TMOD1P28289 359 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 HOXA7P31268 230 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-205ENST00000571272 EXOC3L4Q17RC7 722 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 CNPY4Q8N129 248 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 LRRC57Q8N9N7 239 aa19.1■□□□□ 0.65
SCARF1-205ENST00000571272 STRCQ7RTU9 1775 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 CDK5RAP2Q96SN8 1893 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 KRIT1O00522 736 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 BACH1O14867 736 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 SNHG28P0DPA3 235 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 PSMC6P62333 389 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 FAM98CQ17RN3 349 aaKnown RBP19.09■□□□□ 0.65
SCARF1-205ENST00000571272 HYIQ5T013 277 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 MICALCLQ6ZW33 695 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 PRPF38AQ8NAV1 312 aaKnown RBP19.09■□□□□ 0.65
SCARF1-205ENST00000571272 PBKQ96KB5 322 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 RTCBQ9Y3I0 505 aaKnown RBP19.09■□□□□ 0.65
SCARF1-205ENST00000571272 F8W031 263 aaPredicted RBP19.09■□□□□ 0.65
SCARF1-205ENST00000571272 PGRMC1O00264 195 aaKnown RBP19.09■□□□□ 0.65
SCARF1-205ENST00000571272 DAPK3O43293 454 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 PON1P27169 355 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 ZNF844Q08AG5 666 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 PABPC4Q13310 644 aaKnown RBP eCLIP19.09■□□□□ 0.65
SCARF1-205ENST00000571272 ODF2Q5BJF6 829 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 GJB7Q6PEY0 223 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 PEX26Q7Z412 305 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 FBXL5Q9UKA1 691 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 AJAP1Q9UKB5 411 aaPredicted RBP19.09■□□□□ 0.65
SCARF1-205ENST00000571272 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
SCARF1-205ENST00000571272 H0YGN5 161 aa19.08■□□□□ 0.65
SCARF1-205ENST00000571272 FAM107AO95990 144 aa19.08■□□□□ 0.65
SCARF1-205ENST00000571272 DPY19L2P1Q6NXN4 242 aa19.08■□□□□ 0.65
SCARF1-205ENST00000571272 SPATS2Q86XZ4 545 aaKnown RBP19.08■□□□□ 0.65
SCARF1-205ENST00000571272 TPCN2Q8NHX9 752 aa19.08■□□□□ 0.65
SCARF1-205ENST00000571272 ACTRT1Q8TDG2 376 aa19.08■□□□□ 0.65
SCARF1-205ENST00000571272 BCAS3Q9H6U6 928 aa19.08■□□□□ 0.65
SCARF1-205ENST00000571272 NFS1Q9Y697 457 aa19.08■□□□□ 0.65
SCARF1-205ENST00000571272 TTLL1O95922 423 aa19.08■□□□□ 0.64
SCARF1-205ENST00000571272 AFPP02771 609 aaKnown RBP19.08■□□□□ 0.64
SCARF1-205ENST00000571272 RFC4P35249 363 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms