RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.28
CDRT1-206ENST00000571263 A0A087X0B3 334 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 IGKV6D-21A0A0A0MT36 114 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 PPFIA4O75335 1185 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 CCNE2O96020 404 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 ZNF865P0CJ78 1059 aaPredicted RBP13.32□□□□□ -0.28
CDRT1-206ENST00000571263 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 ZNF445P59923 1031 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 MDM2Q00987 491 aaPredicted RBP13.32□□□□□ -0.28
CDRT1-206ENST00000571263 PRKCZQ05513 592 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 CAMK4Q16566 473 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 CCDC144BQ3MJ40 725 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 PLPPR4Q7Z2D5 763 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 EXOC8Q8IYI6 725 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
CDRT1-206ENST00000571263 CD99L2Q8TCZ2 262 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 RAET1EQ8TD07 263 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
CDRT1-206ENST00000571263 SMARCE1Q969G3 411 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 C7orf25Q9BPX7 421 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 LXNQ9BS40 222 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 ARHGAP39Q9C0H5 1083 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 ZNF302Q9NR11 478 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 NRBP2Q9NSY0 501 aa13.32□□□□□ -0.28
CDRT1-206ENST00000571263 DBR1Q9UK59 544 aaKnown RBP13.32□□□□□ -0.28
CDRT1-206ENST00000571263 PVALEFA0A1B0GWK0 134 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 BACH1O14867 736 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 ARIH2O95376 493 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 PLA2G4BP0C869 781 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 AKR1A1P14550 325 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 ADCYAP1R1P41586 468 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 CTTNQ14247 550 aaKnown RBP13.31□□□□□ -0.28
CDRT1-206ENST00000571263 XKR3Q5GH77 459 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 NT5DC1Q5TFE4 455 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 SWSAP1Q6NVH7 229 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 PPTC7Q8NI37 304 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 CCDC43Q96MW1 224 aaKnown RBP13.31□□□□□ -0.28
CDRT1-206ENST00000571263 SPATA33Q96N06 139 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 PLIN2Q99541 437 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 TIPINQ9BVW5 301 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 SMARCAD1Q9H4L7 1026 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 PDGFCQ9NRA1 345 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 BLOC1S4Q9NUP1 217 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 FLRT1Q9NZU1 646 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 GABBR1Q9UBS5 961 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 GABRQQ9UN88 632 aa13.31□□□□□ -0.28
CDRT1-206ENST00000571263 MAFBQ9Y5Q3 323 aaPredicted RBP13.31□□□□□ -0.28
CDRT1-206ENST00000571263 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 KPNA6O60684 536 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 ECM2O94769 699 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-206ENST00000571263 HMGCRP04035 888 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 CYP2C19P33261 490 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 AFMP43652 599 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 STAT5BP51692 787 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 ARHGAP1Q07960 439 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 CCL14Q16627 93 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 CT47A1Q5JQC4 288 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-206ENST00000571263 LRSAM1Q6UWE0 723 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 DNAJC5GQ8N7S2 189 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 BANK1Q8NDB2 785 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 SPATA20Q8TB22 786 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 GPR20Q99678 358 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 AP5M1Q9H0R1 490 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
CDRT1-206ENST00000571263 SPC25Q9HBM1 224 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 CASP8AP2Q9UKL3 1982 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 EMSYQ7Z589 1322 aa13.3□□□□□ -0.28
CDRT1-206ENST00000571263 SYCE3A1L190 88 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 E9PMD0 336 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 ADCY3O60266 1144 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 MSCO60682 206 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 DUSP11O75319 330 aaKnown RBP13.29□□□□□ -0.28
CDRT1-206ENST00000571263 LGR5O75473 907 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 SMPD1P17405 629 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 YWHABP31946 246 aaKnown RBP13.29□□□□□ -0.28
CDRT1-206ENST00000571263 TCF7P36402 384 aaPredicted RBP13.29□□□□□ -0.28
CDRT1-206ENST00000571263 PPP1R2P41236 205 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 SARSP49591 514 aaKnown RBP13.29□□□□□ -0.28
CDRT1-206ENST00000571263 CPT1AP50416 773 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 DPYDQ12882 1025 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 PSMD2Q13200 908 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 KCNB1Q14721 858 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 ECM1Q16610 540 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 DGKDQ16760 1214 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
CDRT1-206ENST00000571263 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms