RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ATF2P15336 505 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 MIER3Q7Z3K6 550 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 EDEM3Q9BZQ6 932 aa12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
PCDHGA4-201ENST00000571252 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 NTRK3Q16288 839 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 TRIM68Q6AZZ1 485 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 FBXL16Q8N461 479 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 KIFC2Q96AC6 838 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 CCDC17Q96LX7 622 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 RAB3IPQ96QF0 476 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 PPP1R37O75864 691 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 GAP43P17677 238 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 TNNI1P19237 187 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 PPM1FP49593 454 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 MAGOHP61326 146 aaKnown RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 ADCY1Q08828 1119 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 COASYQ13057 564 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 NLRP14Q86W24 1093 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 SREK1Q8WXA9 508 aaKnown RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 RAD54LQ92698 747 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 MAK16Q9BXY0 300 aaKnown RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 SNX24Q9Y343 169 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 EIF3HO15372 352 aaKnown RBP eCLIP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 CIB2O75838 187 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 TROVE2P10155 538 aaKnown RBP eCLIP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 PDE6CP51160 858 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 MS4A14Q96JA4 679 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 TSNARE1Q96NA8 513 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 BHMT2Q9H2M3 363 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 TMEM260Q9NX78 707 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 TXNDC16Q9P2K2 825 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 SASH3O75995 380 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 LRCH2Q5VUJ6 765 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 WDR93Q6P2C0 686 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 GIMAP8Q8ND71 665 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 CELF1Q92879 486 aaKnown RBP12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 SMARCAL1Q9NZC9 954 aa12.07□□□□□ -0.48
PCDHGA4-201ENST00000571252 PNMA6FA0A0J9YX94 578 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 E9PMD0 336 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 MYO1FO00160 1098 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 P3H4Q92791 437 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ELAC2Q9BQ52 826 aaKnown RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZNF408Q9H9D4 720 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 KCND1Q9NSA2 647 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 LRRIQ3A6PVS8 624 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 KRT14P02533 472 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 SLMAPQ14BN4 828 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ARHGAP24Q8N264 748 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 PCDHA6Q9UN73 950 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 PCDHA8Q9Y5H6 950 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 GRID2IPA4D2P6 1211 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 USP17L5A8MUK1 530 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZRANB2O95218 330 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 STRN3Q13033 797 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 SNX1Q13596 522 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 TBC1D1Q86TI0 1168 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 CHURC1Q8WUH1 139 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 N4BP2L2Q92802 583 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 FAM84BQ96KN1 310 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 PSMD1Q99460 953 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 MEFVO15553 781 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ECEL1O95672 775 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 MMEP08473 750 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 DLATP10515 647 aaKnown RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 PPP2R2AP63151 447 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 SGO2Q562F6 1265 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 NSMFQ6X4W1 530 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 ANKZF1Q9H8Y5 726 aa12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 CPSF2Q9P2I0 782 aaKnown RBP12.06□□□□□ -0.48
PCDHGA4-201ENST00000571252 KCNQ2O43526 872 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 TDP2O95551 362 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 POLR2MP0CAP2 368 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 PEX19P40855 299 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 C6orf118Q5T5N4 469 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 CDKAL1Q5VV42 579 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 TRAPPC11Q7Z392 1133 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 NIM1KQ8IY84 436 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 TMEM60Q9H2L4 133 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 VCXQ9H320 206 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZNF148Q9UQR1 794 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 C5P01031 1676 aa12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 BAZ2BQ9UIF8 2168 aaKnown RBP12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 PDS5AQ29RF7 1337 aaKnown RBP12.05□□□□□ -0.48
PCDHGA4-201ENST00000571252 ATF7P17544 494 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms