RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 LRFN3Q9BTN0 628 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 RIC8AQ9NPQ8 531 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 C11orf16Q9NQ32 467 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 FAM217BQ9NTX9 383 aaPredicted RBP20.1■□□□□ 0.81
CIITA-206ENST00000571190 CDY2AQ9Y6F7 541 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 BDP1A6H8Y1 2624 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 MYH7BA7E2Y1 1941 aa20.1■□□□□ 0.81
CIITA-206ENST00000571190 IL9P15248 144 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 IGBP1P78318 339 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 ITGB3BPQ13352 177 aaPredicted RBP20.09■□□□□ 0.81
CIITA-206ENST00000571190 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 RSPH3Q86UC2 560 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 RTN4RL1Q86UN2 441 aaPredicted RBP20.09■□□□□ 0.81
CIITA-206ENST00000571190 FAM178BQ8IXR5 827 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 FIBCD1Q8N539 461 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 ZNF689Q96CS4 500 aaPredicted RBP20.09■□□□□ 0.81
CIITA-206ENST00000571190 NEK1Q96PY6 1258 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 JPH1Q9HDC5 661 aaPredicted RBP20.09■□□□□ 0.81
CIITA-206ENST00000571190 SLC9A2Q9UBY0 812 aa20.09■□□□□ 0.81
CIITA-206ENST00000571190 TCF20Q9UGU0 1960 aaKnown RBP20.08■□□□□ 0.81
CIITA-206ENST00000571190 GRXCR2A6NFK2 248 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 C5orf67F2Z3F1 127 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 BMPR1AP36894 532 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 ACTR2P61160 394 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 MRPS6P82932 125 aaKnown RBP20.08■□□□□ 0.81
CIITA-206ENST00000571190 PLCB4Q15147 1175 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 TIGD5Q53EQ6 642 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 BMP2KLQ5H9B9 411 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 CRIPAKQ8N1N5 446 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 TRAPPC12Q8WVT3 735 aa20.08■□□□□ 0.81
CIITA-206ENST00000571190 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.81
CIITA-206ENST00000571190 V9GY48 417 aaPredicted RBP20.08■□□□□ 0.81
CIITA-206ENST00000571190 NFASCO94856 1347 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 RRN3P2A6NIE6 340 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 H3BQ06 376 aaPredicted RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 STXBP3O00186 592 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 NAPAP54920 295 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 TSGA10IPQ3SY00 556 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 PTCRAQ6ISU1 281 aaPredicted RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 SYNE3Q6ZMZ3 975 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 TSHZ1Q6ZSZ6 1077 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 DHX32Q7L7V1 743 aaKnown RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 CLP1Q92989 425 aaKnown RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 PABPC5Q96DU9 382 aaKnown RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 ANO3Q9BYT9 981 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 FAM49AQ9H0Q0 323 aaPredicted RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 NSUN3Q9H649 340 aaKnown RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 AGO4Q9HCK5 861 aaKnown RBP20.07■□□□□ 0.8
CIITA-206ENST00000571190 TMEM260Q9NX78 707 aa20.07■□□□□ 0.8
CIITA-206ENST00000571190 ADGRA3Q8IWK6 1321 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 PI4K2BG5E9Z4 385 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 MEIS1O00470 390 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 GRM6O15303 877 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 DGKIO75912 1065 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 ATG7O95352 703 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 CDC27P30260 824 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 CD52P31358 61 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 CTNNB1P35222 781 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 CLK2P49760 499 aaKnown RBP20.06■□□□□ 0.8
CIITA-206ENST00000571190 RTN1Q16799 776 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 CEP55Q53EZ4 464 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 PPP1R18Q6NYC8 613 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 PLPPR4Q7Z2D5 763 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 PCDHA2Q9Y5H9 948 aa20.06■□□□□ 0.8
CIITA-206ENST00000571190 IGKV6D-21A0A0A0MT36 114 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 SMCO2A6NFE2 343 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 ADAMTS3O15072 1205 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 ZBTB43O43298 467 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 CCNE2O96020 404 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 FOSP01100 380 aaPredicted RBP20.05■□□□□ 0.8
CIITA-206ENST00000571190 RB1P06400 928 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 STAT5BP51692 787 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 ADCY7P51828 1080 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 TMEM31Q5JXX7 168 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 RNF20Q5VTR2 975 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 TEX2Q8IWB9 1127 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 GJD3Q8N144 294 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 AZI2Q9H6S1 392 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 BARHL2Q9NY43 387 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 SQORQ9Y6N5 450 aa20.05■□□□□ 0.8
CIITA-206ENST00000571190 MICAL3Q7RTP6 2002 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 POTEB3A0JP26 581 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 GPR37L1O60883 481 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 LTBRP36941 435 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 SREBF1P36956 1147 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 TMEM62Q0P6H9 643 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 IER5Q5VY09 327 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 POTEBQ6S5H4 581 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 SDF4Q9BRK5 362 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 PADI3Q9ULW8 664 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 TRPC6Q9Y210 931 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 TRPV2Q9Y5S1 764 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 NCOR1O75376 2440 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 SIP14410 1827 aa20.04■□□□□ 0.8
CIITA-206ENST00000571190 KLF18A0A0U1RQI7 1052 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 FAM86C2PA6NEL3 165 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 DHX15O43143 795 aaKnown RBP20.03■□□□□ 0.8
CIITA-206ENST00000571190 PLA2G5P39877 138 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms