RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MAFGO15525 162 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 EFCAB14O75071 495 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 ATP9AO75110 1047 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 RSPH10BP0C881 870 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 RPS6KB1P23443 525 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 WDR5P61964 334 aaKnown RBP14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 AP3B2Q13367 1082 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 GPNMBQ14956 572 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 TRAF7Q6Q0C0 670 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 PGBD1Q96JS3 809 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 ANO3Q9BYT9 981 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 RNPEPQ9H4A4 650 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 JPH1Q9HDC5 661 aaPredicted RBP14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 TELO2Q9Y4R8 837 aa14.13□□□□□ -0.15
CTDNEP1-205ENST00000570828 NID2Q14112 1375 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 ABHD14A-ACY1A0A1B0GW23 586 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 TREHO43280 583 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 CAND2O75155 1236 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 IGFBP4P22692 258 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 ADD1P35611 737 aaKnown RBP14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 ARHGAP4P98171 946 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 AKAP17AQ02040 695 aaKnown RBP14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 IKBKEQ14164 716 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 MBTPS1Q14703 1052 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 PFKFB3Q16875 520 aaPredicted RBP14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 CCDC12Q8WUD4 166 aaPredicted RBP14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 LMBR1Q8WVP7 490 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 SEPT1Q8WYJ6 367 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 GLG1Q92896 1179 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 MXRA8Q9BRK3 442 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 ZBED2Q9BTP6 218 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 KCNH7Q9NS40 1196 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 SETD4Q9NVD3 440 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 NRCAMQ92823 1304 aa14.12□□□□□ -0.15
CTDNEP1-205ENST00000570828 ARHGAP33O14559 1287 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 TLL1O43897 1013 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 LGR5O75473 907 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 CTSHP09668 335 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 SCG2P13521 617 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 VCANP13611 3396 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 MARK3P27448 753 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 SREBF1P36956 1147 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 PPFIA1Q13136 1202 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 ADGRE1Q14246 886 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 SCN5AQ14524 2016 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 CEP55Q53EZ4 464 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 ADGRD1Q6QNK2 874 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 FBXL16Q8N461 479 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 USP38Q8NB14 1042 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 TMEM260Q9NX78 707 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 ERAP1Q9NZ08 941 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
CTDNEP1-205ENST00000570828 ZNF76P36508 570 aa14.1□□□□□ -0.15
CTDNEP1-205ENST00000570828 DEFB103AP81534 67 aa14.1□□□□□ -0.15
CTDNEP1-205ENST00000570828 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
CTDNEP1-205ENST00000570828 AGXT2Q9BYV1 514 aa14.1□□□□□ -0.15
CTDNEP1-205ENST00000570828 SMARCAD1Q9H4L7 1026 aa14.1□□□□□ -0.15
CTDNEP1-205ENST00000570828 AZI2Q9H6S1 392 aa14.1□□□□□ -0.15
CTDNEP1-205ENST00000570828 GSTTP1A0A1W2PQM5 241 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 ESYT2A0FGR8 921 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 CLK2P49760 499 aaKnown RBP14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 GRIK4Q16099 956 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 TCTN1Q2MV58 587 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 MCTP2Q6DN12 878 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 TAF2Q6P1X5 1199 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 TMCO2Q7Z6W1 182 aaPredicted RBP14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 REXO1Q8N1G1 1221 aaKnown RBP14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 CYP2W1Q8TAV3 490 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 TMC2Q8TDI7 906 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 PHKBQ93100 1093 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 CERS4Q9HA82 394 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 C6orf50Q9HD87 102 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 TUBE1Q9UJT0 475 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 NFASCO94856 1347 aa14.09□□□□□ -0.15
CTDNEP1-205ENST00000570828 MYH7BA7E2Y1 1941 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 PRPF3O43395 683 aaKnown RBP14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 GTPBP6O43824 516 aaPredicted RBP14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 GJB5O95377 273 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 AMHP03971 560 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 GNA11P29992 359 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 ACTR2P61160 394 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 ADAM17P78536 824 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 TAP1Q03518 808 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 PLEKHG4Q58EX7 1191 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 RUFY3Q7L099 469 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 NIPA1Q7RTP0 329 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 RSPH3Q86UC2 560 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 MICALL1Q8N3F8 863 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 CCDC148Q8NFR7 591 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 ARNTL2Q8WYA1 636 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 SEPT8Q92599 483 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 TNPO1Q92973 898 aaKnown RBP14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 RAD9AQ99638 391 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 RNF26Q9BY78 433 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms