RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 COL4A6Q14031 1691 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 RALGAPA2Q2PPJ7 1873 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 LINC00271P0C7V0 271 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 ARP10275 920 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 INSRRP14616 1297 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 GPM6BQ13491 265 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 LEXMQ3ZCV2 418 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 FBXO47Q5MNV8 452 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.91■□□□□ 0.3
NDE1-203ENST00000570727 KHSRPQ92945 711 aaKnown RBP eCLIP16.91■□□□□ 0.3
NDE1-203ENST00000570727 IL17RAQ96F46 866 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 PGBD1Q96JS3 809 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 JPH1Q9HDC5 661 aaPredicted RBP16.91■□□□□ 0.3
NDE1-203ENST00000570727 CD320Q9NPF0 282 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 RBM28Q9NW13 759 aaKnown RBP16.91■□□□□ 0.3
NDE1-203ENST00000570727 SLC9A2Q9UBY0 812 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 CDY2AQ9Y6F7 541 aa16.91■□□□□ 0.3
NDE1-203ENST00000570727 C5orf42Q9H799 3197 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 RRN3P2A6NIE6 340 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 STXBP3O00186 592 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 ZBTB43O43298 467 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 NAPAP54920 295 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 IGBP1P78318 339 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 RTN1Q16799 776 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 RSPH3Q86UC2 560 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 AGO3Q9H9G7 860 aaKnown RBP16.9■□□□□ 0.3
NDE1-203ENST00000570727 NFASCO94856 1347 aa16.9■□□□□ 0.3
NDE1-203ENST00000570727 MEIS1O00470 390 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 ATG7O95352 703 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 FOSP01100 380 aaPredicted RBP16.89■□□□□ 0.29
NDE1-203ENST00000570727 KCNA5P22460 613 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 CDC27P30260 824 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 CLK2P49760 499 aaKnown RBP16.89■□□□□ 0.29
NDE1-203ENST00000570727 ACTR2P61160 394 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 ITGB3BPQ13352 177 aaPredicted RBP16.89■□□□□ 0.29
NDE1-203ENST00000570727 PTPROQ16827 1216 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 PLPPR4Q7Z2D5 763 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 RTN4RL1Q86UN2 441 aaPredicted RBP16.89■□□□□ 0.29
NDE1-203ENST00000570727 TEX2Q8IWB9 1127 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 FIBCD1Q8N539 461 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 ZNF689Q96CS4 500 aaPredicted RBP16.89■□□□□ 0.29
NDE1-203ENST00000570727 C1QTNF1Q9BXJ1 281 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 RC3H2Q9HBD1 1191 aaKnown RBP16.89■□□□□ 0.29
NDE1-203ENST00000570727 AGO4Q9HCK5 861 aaKnown RBP16.89■□□□□ 0.29
NDE1-203ENST00000570727 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 ATG2AQ2TAZ0 1938 aa16.89■□□□□ 0.29
NDE1-203ENST00000570727 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 STAT5BP51692 787 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 ADCY7P51828 1080 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 MRPS6P82932 125 aaKnown RBP16.88■□□□□ 0.29
NDE1-203ENST00000570727 PLCB4Q15147 1175 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 CEP55Q53EZ4 464 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 TCEAL5Q5H9L2 206 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 TSHZ1Q6ZSZ6 1077 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 CRIPAKQ8N1N5 446 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 TRAPPC12Q8WVT3 735 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 LINC01599Q8WXQ3 324 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 SDF4Q9BRK5 362 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 ANO3Q9BYT9 981 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 FAM49AQ9H0Q0 323 aaPredicted RBP16.88■□□□□ 0.29
NDE1-203ENST00000570727 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 PCDHA2Q9Y5H9 948 aa16.88■□□□□ 0.29
NDE1-203ENST00000570727 IGKV6D-21A0A0A0MT36 114 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 KLF18A0A0U1RQI7 1052 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 CD52P31358 61 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
NDE1-203ENST00000570727 BMPR1AP36894 532 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 SREBF1P36956 1147 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 COL19A1Q14993 1142 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 IER5Q5VY09 327 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
NDE1-203ENST00000570727 FAM178BQ8IXR5 827 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 CLP1Q92989 425 aaKnown RBP16.87■□□□□ 0.29
NDE1-203ENST00000570727 SQORQ9Y6N5 450 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 EVPLQ92817 2033 aa16.87■□□□□ 0.29
NDE1-203ENST00000570727 GRXCR2A6NFK2 248 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 GOLGA8BA8MQT2 603 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 hCG_1984214I3L0E3 225 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 ADAMTS3O15072 1205 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 DGKIO75912 1065 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 CCNE2O96020 404 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
NDE1-203ENST00000570727 RB1P06400 928 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 CTNNB1P35222 781 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 TIGD5Q53EQ6 642 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 ZNF713Q8N859 430 aaPredicted RBP16.86■□□□□ 0.29
NDE1-203ENST00000570727 TRPC6Q9Y210 931 aa16.86■□□□□ 0.29
NDE1-203ENST00000570727 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 FAM86B1E9PN63 330 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 H3BQ06 376 aaPredicted RBP16.85■□□□□ 0.29
NDE1-203ENST00000570727 GRM6O15303 877 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 DHX15O43143 795 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms