RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 CCDC83Q8IWF9 413 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 PHKBQ93100 1093 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 ZMYND12Q9H0C1 365 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 SLC9A2Q9UBY0 812 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 EYSQ5T1H1 3165 aa17.21■□□□□ 0.35
RAB40B-203ENST00000570676 NRCAMQ92823 1304 aa17.21■□□□□ 0.34
RAB40B-203ENST00000570676 EPOPA6NHQ4 379 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 GNAT1P11488 350 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 TAP1Q03518 808 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 PLEKHG4Q58EX7 1191 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 JAKMIP3Q5VZ66 844 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 DBF4BQ8NFT6 615 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
RAB40B-203ENST00000570676 AGO4Q9HCK5 861 aaKnown RBP17.2■□□□□ 0.34
RAB40B-203ENST00000570676 ERAP1Q9NZ08 941 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
RAB40B-203ENST00000570676 NLRC5Q86WI3 1866 aa17.2■□□□□ 0.34
RAB40B-203ENST00000570676 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 LCHNA4D1U4 455 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 FAM86B1E9PN63 330 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 MEIS1O00470 390 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 TLL1O43897 1013 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 EFCAB14O75071 495 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 FAM86B2P0C5J1 330 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 IFNAR1P17181 557 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 MARK3P27448 753 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 PPFIA1Q13136 1202 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 CUL4AQ13619 759 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 FAM26DQ5JW98 314 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 RUFY4Q6ZNE9 571 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 COL25A1Q9BXS0 654 aaPredicted RBP17.19■□□□□ 0.34
RAB40B-203ENST00000570676 SMARCAD1Q9H4L7 1026 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 PRDM6Q9NQX0 595 aa17.19■□□□□ 0.34
RAB40B-203ENST00000570676 MBLAC1A4D2B0 266 aaPredicted RBP17.18■□□□□ 0.34
RAB40B-203ENST00000570676 KIF28PB7ZC32 967 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 CPLX1O14810 134 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 GJB5O95377 273 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
RAB40B-203ENST00000570676 CYP3A4P08684 503 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 ACTR2P61160 394 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 IKBKEQ14164 716 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 GRIK4Q16099 956 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 MARCH8Q5T0T0 291 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 NIPA1Q7RTP0 329 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 RPAINQ86UA6 219 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 REXO1Q8N1G1 1221 aaKnown RBP17.18■□□□□ 0.34
RAB40B-203ENST00000570676 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
RAB40B-203ENST00000570676 GLG1Q92896 1179 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 SDF4Q9BRK5 362 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 CERS4Q9HA82 394 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 TUBE1Q9UJT0 475 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 MYH9P35579 1960 aaKnown RBP17.18■□□□□ 0.34
RAB40B-203ENST00000570676 RALGAPA2Q2PPJ7 1873 aa17.18■□□□□ 0.34
RAB40B-203ENST00000570676 CHD7Q9P2D1 2997 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 CCNE2O96020 404 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 IGFBP4P22692 258 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 MGAT3Q09327 533 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 TAF2Q6P1X5 1199 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
RAB40B-203ENST00000570676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
RAB40B-203ENST00000570676 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 C6orf50Q9HD87 102 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 UNC80Q8N2C7 3258 aa17.17■□□□□ 0.34
RAB40B-203ENST00000570676 RFXAPO00287 272 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 DHX15O43143 795 aaKnown RBP17.16■□□□□ 0.34
RAB40B-203ENST00000570676 ATG7O95352 703 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 PLCB4Q15147 1175 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 CCDC148Q8NFR7 591 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 PPM1EQ8WY54 764 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
RAB40B-203ENST00000570676 VPS54Q9P1Q0 977 aa17.16■□□□□ 0.34
RAB40B-203ENST00000570676 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-203ENST00000570676 PRRC2BQ5JSZ5 2229 aaKnown RBP17.16■□□□□ 0.34
RAB40B-203ENST00000570676 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 IGKV6D-21A0A0A0MT36 114 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 DDX39AO00148 427 aaKnown RBP17.15■□□□□ 0.34
RAB40B-203ENST00000570676 DTNBO60941 627 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 CDKL5O76039 1030 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 CHRNA1P02708 482 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 INSRRP14616 1297 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 POU3F3P20264 500 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-203ENST00000570676 GNA11P29992 359 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 ZNF76P36508 570 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 MCTP2Q6DN12 878 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 PLPPR4Q7Z2D5 763 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 ARNTL2Q8WYA1 636 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 SEPT8Q92599 483 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 ZBTB10Q96DT7 871 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
RAB40B-203ENST00000570676 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
RAB40B-203ENST00000570676 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms