RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 MYBPC2Q14324 1141 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 NEDD9Q14511 834 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 PPP2R5AQ15172 486 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 IL17AQ16552 155 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 CACNA2D4Q7Z3S7 1137 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 C2orf69Q8N8R5 385 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 MCPH1Q8NEM0 835 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 HAS1Q92839 578 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 IFT74Q96LB3 600 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 MRPL44Q9H9J2 332 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 EMILIN3Q9NT22 766 aa6.67□□□□□ -1.34
CYLD-216ENST00000569891 DBR1Q9UK59 544 aaKnown RBP6.67□□□□□ -1.34
CYLD-216ENST00000569891 GLTPD2A6NH11 291 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 LRRC10BA6NIK2 292 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 PDXKO00764 312 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 CDC25AP30304 524 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 RASGRP2Q7LDG7 609 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 TRMT44Q8IYL2 757 aaKnown RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 NEK11Q8NG66 645 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 TRPM4Q8TD43 1214 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 SYTL5Q8TDW5 730 aaPredicted RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 MROH8Q9H579 483 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 RTN4Q9NQC3 1192 aaKnown RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 IVNS1ABPQ9Y6Y0 642 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 NFASCO94856 1347 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 RPTORQ8N122 1335 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 A0A087X0B3 334 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 SHTN1A0MZ66 631 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 TESPA1A2RU30 521 aaPredicted RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 PP2D1A8MPX8 630 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 LYPLA2O95372 231 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 SPA17Q15506 151 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 FAM178BQ8IXR5 827 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 MYCT1Q8N699 235 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 TUBGCP2Q9BSJ2 902 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 OLFML3Q9NRN5 406 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 HOMER2Q9NSB8 354 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 NRBP2Q9NSY0 501 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 SPTLC3Q9NUV7 552 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 UBIAD1Q9Y5Z9 338 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 DOCK1Q14185 1865 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 POTEB3A0JP26 581 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 POTECB2RU33 542 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 SLC16A3O15427 465 aaKnown RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 USO1O60763 962 aaKnown RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 DDNO94850 711 aaPredicted RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 CETPP11597 493 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 GCLCP48506 637 aaPredicted RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 RPS6P62753 249 aaKnown RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 NR1I3Q14994 352 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 EAPPQ56P03 285 aaPredicted RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 CENPPQ6IPU0 288 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 POTEBQ6S5H4 581 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 RIOX2Q8IUF8 465 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 CRYGNQ8WXF5 182 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 ATG4CQ96DT6 458 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 CNOT6LQ96LI5 555 aaKnown RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 FAM81BQ96LP2 452 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 AGBL1Q96MI9 1066 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 PNMA5Q96PV4 448 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 TSGA10Q9BZW7 698 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 PXMP2Q9NR77 195 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 KCND1Q9NSA2 647 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 TYW1Q9NV66 732 aaKnown RBP6.66□□□□□ -1.34
CYLD-216ENST00000569891 AFG3L2Q9Y4W6 797 aa6.66□□□□□ -1.34
CYLD-216ENST00000569891 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.66□□□□□ -1.34
CYLD-216ENST00000569891 MYMKA6NI61 221 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 SPDYE5A6NIY4 337 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 ASB14A6NK59 587 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 KIAA0391O15091 583 aaKnown RBP6.65□□□□□ -1.34
CYLD-216ENST00000569891 CHMP2AO43633 222 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 KIF5CO60282 957 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 PSMD10O75832 226 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 HOXC6P09630 235 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 TGFB3P10600 412 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 SNAP25P60880 206 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 CDAN1Q8IWY9 1227 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 SHCBP1Q8NEM2 672 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 OR8K1Q8NGG5 319 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 KIFAP3Q92845 792 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 MKNK1Q9BUB5 465 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 SLC39A2Q9NP94 309 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 FBXO28Q9NVF7 368 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 SLC45A1Q9Y2W3 748 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 PCDHA10Q9Y5I2 948 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 NBEAQ8NFP9 2946 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 EIF3JO75822 258 aaKnown RBP6.65□□□□□ -1.34
CYLD-216ENST00000569891 NR3C2P08235 984 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 GUCY2CP25092 1073 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 GTF2A2P52657 109 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 RRP1BQ14684 758 aaKnown RBP6.65□□□□□ -1.34
CYLD-216ENST00000569891 KRT31Q15323 416 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 ARHGAP29Q52LW3 1261 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 FIGNQ5HY92 759 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 OTOP1Q7RTM1 612 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 CATSPER3Q86XQ3 398 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 C4orf19Q8IY42 314 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.34
CYLD-216ENST00000569891 MMTAG2Q9BU76 263 aaKnown RBP6.65□□□□□ -1.34
CYLD-216ENST00000569891 DEF6Q9H4E7 631 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms