RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 BMPR1AP36894 532 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 BTG3Q14201 252 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-220ENST00000569827 COL19A1Q14993 1142 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 SART3Q15020 963 aaKnown RBP13.88□□□□□ -0.19
CAPN3-220ENST00000569827 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 MARCH8Q5T0T0 291 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 ADGRD2Q7Z7M1 963 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 NLRX1Q86UT6 975 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
CAPN3-220ENST00000569827 CTCFLQ8NI51 663 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-220ENST00000569827 GLG1Q92896 1179 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 EHMT1Q9H9B1 1298 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 MUTYHQ9UIF7 546 aa13.88□□□□□ -0.19
CAPN3-220ENST00000569827 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
CAPN3-220ENST00000569827 MRPL42Q9Y6G3 142 aaKnown RBP13.88□□□□□ -0.19
CAPN3-220ENST00000569827 MBTPS2O43462 519 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 ALADP13716 330 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 DNAJB1P25685 340 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 IRX6P78412 446 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-220ENST00000569827 TRAF1Q13077 416 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 CAMK1Q14012 370 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-220ENST00000569827 PCYT2Q99447 389 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 SENP7Q9BQF6 1050 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 C11orf84Q9BUA3 381 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-220ENST00000569827 SPZ1Q9BXG8 430 aa13.87□□□□□ -0.19
CAPN3-220ENST00000569827 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
CAPN3-220ENST00000569827 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 C5orf67F2Z3F1 127 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 SGSM2O43147 1006 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 PRC1O43663 620 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 DDAH1O94760 285 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 MRPS6P82932 125 aaKnown RBP13.86□□□□□ -0.19
CAPN3-220ENST00000569827 AAMPQ13685 434 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 TMEM266Q2M3C6 531 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 PUS10Q3MIT2 529 aaKnown RBP13.86□□□□□ -0.19
CAPN3-220ENST00000569827 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 HFE2Q6ZVN8 426 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 ADHFE1Q8IWW8 467 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 RUFY2Q8WXA3 655 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 FBXL18Q96ME1 805 aa13.86□□□□□ -0.19
CAPN3-220ENST00000569827 ARIH1Q9Y4X5 557 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-220ENST00000569827 PIK3CDO00329 1044 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-220ENST00000569827 DGKIO75912 1065 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 ITGB1P05556 798 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 INSRRP14616 1297 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 RBM10P98175 930 aaKnown RBP13.85□□□□□ -0.19
CAPN3-220ENST00000569827 MTMR1Q13613 665 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 TAF2Q6P1X5 1199 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 TSHZ1Q6ZSZ6 1077 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 CYP2W1Q8TAV3 490 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 SEPT1Q8WYJ6 367 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 CLP1Q92989 425 aaKnown RBP13.85□□□□□ -0.19
CAPN3-220ENST00000569827 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
CAPN3-220ENST00000569827 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 PSTPIP2Q9H939 334 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 ERAP1Q9NZ08 941 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 HCSTQ9UBK5 93 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 TRPC6Q9Y210 931 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 UBIAD1Q9Y5Z9 338 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 USP34Q70CQ2 3546 aa13.85□□□□□ -0.19
CAPN3-220ENST00000569827 MBLAC1A4D2B0 266 aaPredicted RBP13.84□□□□□ -0.19
CAPN3-220ENST00000569827 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 DDX39AO00148 427 aaKnown RBP13.84□□□□□ -0.19
CAPN3-220ENST00000569827 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 MMP1P03956 469 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 RB1P06400 928 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 KIF5BP33176 963 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 NDUFV1P49821 464 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 MRE11P49959 708 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 SMAD2Q15796 467 aaKnown RBP13.84□□□□□ -0.19
CAPN3-220ENST00000569827 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 RBM23Q86U06 439 aaKnown RBP13.84□□□□□ -0.19
CAPN3-220ENST00000569827 RSPH3Q86UC2 560 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 RNF135Q8IUD6 432 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 GIMAP8Q8ND71 665 aaPredicted RBP13.84□□□□□ -0.19
CAPN3-220ENST00000569827 PPP1R16BQ96T49 567 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 PLAGL2Q9UPG8 496 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 FAM50BQ9Y247 325 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
CAPN3-220ENST00000569827 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 NHLH1Q02575 133 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 SMAD4Q13485 552 aaKnown RBP13.83□□□□□ -0.2
CAPN3-220ENST00000569827 PLCB4Q15147 1175 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 XRRA1Q6P2D8 792 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 MICU3Q86XE3 530 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 KLHL23Q8NBE8 558 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 MAP4K1Q92918 833 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 PHOX2BQ99453 314 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 LMAN2LQ9H0V9 348 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 SMARCAD1Q9H4L7 1026 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 JPH1Q9HDC5 661 aaPredicted RBP13.83□□□□□ -0.2
CAPN3-220ENST00000569827 JADE2Q9NQC1 790 aa13.83□□□□□ -0.2
CAPN3-220ENST00000569827 PRKAG3Q9UGI9 489 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms