RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NFE2Q16621 373 aaPredicted RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 TNNI3KQ59H18 835 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 HHATQ5VTY9 493 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 MMS22LQ6ZRQ5 1243 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 CCDC80Q76M96 950 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 TAB3Q8N5C8 712 aaPredicted RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 DPP7Q9UHL4 492 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 BLOC1S6Q9UL45 172 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 FPGT-TNNI3KV9GXZ4 949 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 CICQ96RK0 1608 aaPredicted RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 SPEF2Q9C093 1822 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 AKAP11Q9UKA4 1901 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 SLC27A2O14975 620 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 FOXN1O15353 648 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 MRPL58Q14197 206 aaKnown RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 CKAP2LQ8IYA6 745 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 WASF1Q92558 559 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 MTMR8Q96EF0 704 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 XAGE2Q96GT9 111 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 JPH2Q9BR39 696 aaPredicted RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 AZI2Q9H6S1 392 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 NGRNQ9NPE2 291 aaKnown RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 LRFN2Q9ULH4 789 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 IPPQ9Y573 584 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 THSD7AQ9UPZ6 1657 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 BRCA2P51587 3418 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 COL5A3P25940 1745 aaPredicted RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 UQCRHLA0A096LP55 91 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 VSTM5A8MXK1 200 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 P4HBP07237 508 aaKnown RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 UQCRHP07919 91 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 MASP1P48740 699 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 SPOUT1Q5T280 376 aaKnown RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 IQCEQ6IPM2 695 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 CCBE1Q6UXH8 406 aaPredicted RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 MFSD6Q6ZSS7 791 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 SUN5Q8TC36 379 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 TRIM55Q9BYV6 548 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 HPS4Q9NQG7 708 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 AAASQ9NRG9 546 aa7.33□□□□□ -1.24
SMG1-217ENST00000569764 ZNF215Q9UL58 517 aaPredicted RBP7.33□□□□□ -1.24
SMG1-217ENST00000569764 DDX60Q8IY21 1712 aaKnown RBP7.32□□□□□ -1.24
SMG1-217ENST00000569764 SLC15A5A6NIM6 579 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 WNT10BO00744 389 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 LARGE1O95461 756 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 CTNNA1P35221 906 aaKnown RBP7.32□□□□□ -1.24
SMG1-217ENST00000569764 SKOR1P84550 965 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 NUGGCQ68CJ6 796 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 IFNL1Q8IU54 200 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 LILRB2Q8N423 598 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 ARHGEF2Q92974 986 aaKnown RBP7.32□□□□□ -1.24
SMG1-217ENST00000569764 SRRDQ9UH36 339 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 SNX14Q9Y5W7 946 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 RREB1Q92766 1687 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 ZNF213O14771 459 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 ADORA1P30542 326 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 SOX10P56693 466 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 BNIP1Q12981 228 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 NMIQ13287 307 aaPredicted RBP7.32□□□□□ -1.24
SMG1-217ENST00000569764 LAMA4Q16363 1823 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 KIAA1614Q5VZ46 1190 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 PI16Q6UXB8 463 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 FAM9CQ8IZT9 166 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 SPC24Q8NBT2 197 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 PRR7Q8TB68 274 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMG1-217ENST00000569764 MMP19Q99542 508 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 PAPOLBQ9NRJ5 636 aaKnown RBP7.32□□□□□ -1.24
SMG1-217ENST00000569764 TTC41PQ6P2S7 1318 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 TBC1D8O95759 1140 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 NEK4P51957 841 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 ALG1Q9BT22 464 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 TSPY26PQ9H489 355 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 CEP72Q9P209 647 aa7.32□□□□□ -1.24
SMG1-217ENST00000569764 C2orf81A6NN90 581 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 TOR1BO14657 336 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 WDR46O15213 610 aaKnown RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 KLHL41O60662 606 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 PGRP06401 933 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 CYP2B6P20813 491 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 SARSP49591 514 aaKnown RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 ST3GAL1Q11201 340 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 FAM110CQ1W6H9 321 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 DACT2Q5SW24 774 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 CDCA2Q69YH5 1023 aaPredicted RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 EEPD1Q7L9B9 569 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 SMARCC2Q8TAQ2 1214 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 TGFBRAP1Q8WUH2 860 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 BCL2L12Q9HB09 334 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 ORC3Q9UBD5 711 aaPredicted RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 ZNF609O15014 1411 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 SMC2O95347 1197 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 ATF7P17544 494 aaPredicted RBP7.31□□□□□ -1.24
SMG1-217ENST00000569764 DNM2P50570 870 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 SYCP1Q15431 976 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 WDR45BQ5MNZ6 344 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 MAGEB6Q8N7X4 407 aa7.31□□□□□ -1.24
SMG1-217ENST00000569764 ENAHQ8N8S7 591 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms