RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 KCNA4P22459 653 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 PPFIA1Q13136 1202 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 SLC35G1Q2M3R5 365 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 NPAS4Q8IUM7 802 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 KLHL23Q8NBE8 558 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 POF1BQ8WVV4 589 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 PIGSQ96S52 555 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 FTHL17Q9BXU8 183 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 RTEL1Q9NZ71 1219 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 USP15Q9Y4E8 981 aaPredicted RBP14.4□□□□□ -0.1
SNX29-207ENST00000568949 SUPT16HQ9Y5B9 1047 aaKnown RBP14.4□□□□□ -0.1
SNX29-207ENST00000568949 CDY2AQ9Y6F7 541 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 KIAA1671Q9BY89 1806 aa14.4□□□□□ -0.1
SNX29-207ENST00000568949 STAG3L1P0CL83 205 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 ATF7P17544 494 aaPredicted RBP14.39□□□□□ -0.11
SNX29-207ENST00000568949 NRIP1P48552 1158 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 HDAC1Q13547 482 aaPredicted RBP14.39□□□□□ -0.11
SNX29-207ENST00000568949 GRM4Q14833 912 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 CWC27Q6UX04 472 aaKnown RBP14.39□□□□□ -0.11
SNX29-207ENST00000568949 DNAJB3Q8WWF6 145 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 LINC01599Q8WXQ3 324 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 AGO3Q9H9G7 860 aaKnown RBP14.39□□□□□ -0.11
SNX29-207ENST00000568949 ERAP1Q9NZ08 941 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 TUBE1Q9UJT0 475 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 TELO2Q9Y4R8 837 aa14.39□□□□□ -0.11
SNX29-207ENST00000568949 ZFHX2Q9C0A1 2572 aaPredicted RBP14.38□□□□□ -0.11
SNX29-207ENST00000568949 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 HIP1O00291 1037 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 CYTH3O43739 400 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 GLP2RO95838 553 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 TCF7P36402 384 aaPredicted RBP14.38□□□□□ -0.11
SNX29-207ENST00000568949 NUBP1P53384 320 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 MRPS6P82932 125 aaKnown RBP14.38□□□□□ -0.11
SNX29-207ENST00000568949 FOXK2Q01167 660 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 SP4Q02446 784 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 GRIK4Q16099 956 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 PCNX4Q63HM2 1172 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 FAM43BQ6ZT52 329 aaPredicted RBP14.38□□□□□ -0.11
SNX29-207ENST00000568949 RTN4RL1Q86UN2 441 aaPredicted RBP14.38□□□□□ -0.11
SNX29-207ENST00000568949 NLRX1Q86UT6 975 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 SEPT1Q8WYJ6 367 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 ASIC4Q96FT7 647 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 DIAPH3Q9NSV4 1193 aa14.38□□□□□ -0.11
SNX29-207ENST00000568949 BARX2Q9UMQ3 279 aaPredicted RBP14.38□□□□□ -0.11
SNX29-207ENST00000568949 AVPR2P30518 371 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 CD52P31358 61 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 UBE3AQ05086 875 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 MARCH8Q5T0T0 291 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 IER5Q5VY09 327 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 CYB5R4Q7L1T6 521 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 RBM23Q86U06 439 aaKnown RBP14.37□□□□□ -0.11
SNX29-207ENST00000568949 ATP8B4Q8TF62 1192 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 SUSD6Q92537 303 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 CDCA3Q99618 268 aaPredicted RBP14.37□□□□□ -0.11
SNX29-207ENST00000568949 SMARCAD1Q9H4L7 1026 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 TLE6Q9H808 572 aa14.37□□□□□ -0.11
SNX29-207ENST00000568949 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
SNX29-207ENST00000568949 PLXNA4Q9HCM2 1894 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 GSTTP1A0A1W2PQM5 241 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 RRN3P2A6NIE6 340 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 KCNA2P16389 499 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
SNX29-207ENST00000568949 PTPN21Q16825 1174 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 SMARCC2Q8TAQ2 1214 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 CUL5Q93034 780 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 GPRASP2Q96D09 838 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 CDHR1Q96JP9 859 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 RPGRIP1Q96KN7 1286 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 FAM86C1Q9NVL1 165 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 TRPV2Q9Y5S1 764 aa14.36□□□□□ -0.11
SNX29-207ENST00000568949 LOXHD1Q8IVV2 1947 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 PROB1E7EW31 1015 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 M0QZ92 97 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 SCG2P13521 617 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 MARK3P27448 753 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 PAN2Q504Q3 1202 aaKnown RBP14.35□□□□□ -0.11
SNX29-207ENST00000568949 PDE12Q6L8Q7 609 aaKnown RBP14.35□□□□□ -0.11
SNX29-207ENST00000568949 ATOH1Q92858 354 aaPredicted RBP14.35□□□□□ -0.11
SNX29-207ENST00000568949 GLG1Q92896 1179 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 AAASQ9NRG9 546 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 LRFN2Q9ULH4 789 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 PADI3Q9ULW8 664 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 PCDHB12Q9Y5F1 795 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 FAM186AA6NE01 2351 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 SPTBN4Q9H254 2564 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 IGSF9BQ9UPX0 1349 aa14.35□□□□□ -0.11
SNX29-207ENST00000568949 MEIS2O14770 477 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 ATP9AO75110 1047 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 TROAPQ12815 778 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 TRDNQ13061 729 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 PAK2Q13177 524 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 DUSP6Q16828 381 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 TMEM184AQ6ZMB5 413 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 MICAL1Q8TDZ2 1067 aa14.34□□□□□ -0.11
SNX29-207ENST00000568949 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
SNX29-207ENST00000568949 NEK1Q96PY6 1258 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms