RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 ZNF408Q9H9D4 720 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 INTS13Q9NVM9 706 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 ZNF536O15090 1300 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 ABCB11O95342 1321 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 KIF13BQ9NQT8 1826 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 MYMKA6NI61 221 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 PES1O00541 588 aaKnown RBP9.54□□□□□ -0.88
TCF4-241ENST00000568740 LZTS3O60299 673 aaPredicted RBP9.54□□□□□ -0.88
TCF4-241ENST00000568740 CTNND1O60716 968 aaKnown RBP9.54□□□□□ -0.88
TCF4-241ENST00000568740 MED24O75448 989 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 PPP4R3BQ5MIZ7 849 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 MRFAP1L1Q96HT8 127 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 WDR18Q9BV38 432 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 R3HDMLQ9H3Y0 253 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 CASS4Q9NQ75 786 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 PICK1Q9NRD5 415 aa9.54□□□□□ -0.88
TCF4-241ENST00000568740 BMP2KQ9NSY1 1161 aaPredicted RBP9.54□□□□□ -0.88
TCF4-241ENST00000568740 TRMT1Q9NXH9 659 aaKnown RBP9.54□□□□□ -0.88
TCF4-241ENST00000568740 GREB1LQ9C091 1923 aaPredicted RBP9.54□□□□□ -0.88
TCF4-241ENST00000568740 SFI1A8K8P3 1242 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 SMTNL1A8MU46 457 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 hCG_1984214I3L0E3 225 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 EML1O00423 815 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 MSH4O15457 936 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 CAPN15O75808 1086 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 ARP10275 920 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 ZSCAN20P17040 1043 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 EIF2AK2P19525 551 aaKnown RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 TPD52L1Q16890 204 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 TMEM266Q2M3C6 531 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 KRT79Q5XKE5 535 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 CCSAPQ6IQ19 270 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 ZNF713Q8N859 430 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 PIGOQ8TEQ8 1089 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 LENG9Q96B70 501 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 CALML4Q96GE6 196 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 SLF1Q9BQI6 1058 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 FGFBP2Q9BYJ0 223 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 CCSER1Q9C0I3 900 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 MUC3BQ9H195 1237 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 ZHX1Q9UKY1 873 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 INPP5FQ9Y2H2 1132 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 BRCA1P38398 1863 aaKnown RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 LTBP3Q9NS15 1303 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 GCOM1H8Y6P7 765 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 TIMM44O43615 452 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 KLRC4O43908 158 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 CAVIN2O95810 425 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 POLR2MP0CAP2 368 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 MYCLP12524 364 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 PRPHP41219 470 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 MAP3K10Q02779 954 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 PABPC4Q13310 644 aaKnown RBP eCLIP9.53□□□□□ -0.88
TCF4-241ENST00000568740 DSG2Q14126 1118 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 CTTNQ14247 550 aaKnown RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 ZNF394Q53GI3 561 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 DNTTIP2Q5QJE6 756 aaKnown RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 PPP4R3AQ6IN85 833 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 CC2D1AQ6P1N0 951 aaPredicted RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 KRT26Q7Z3Y9 468 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 GLYCTKQ8IVS8 523 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 MLKLQ8NB16 471 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 NELFBQ8WX92 580 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 KLRG1Q96E93 195 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 GSDMAQ96QA5 445 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 TRIM9Q9C026 710 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 VPS16Q9H269 839 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 RANBP17Q9H2T7 1088 aaKnown RBP9.53□□□□□ -0.88
TCF4-241ENST00000568740 KBTBD4Q9NVX7 518 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 DCTN4Q9UJW0 460 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 MYH7BA7E2Y1 1941 aa9.53□□□□□ -0.88
TCF4-241ENST00000568740 USP27XA6NNY8 438 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 USP2O75604 605 aaPredicted RBP9.52□□□□□ -0.88
TCF4-241ENST00000568740 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.88
TCF4-241ENST00000568740 BACE1P56817 501 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 SP4Q02446 784 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 LONRF1Q17RB8 773 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 MAEAQ7L5Y9 396 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 SCYL3Q8IZE3 742 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 CLP1Q92989 425 aaKnown RBP9.52□□□□□ -0.88
TCF4-241ENST00000568740 WDR11Q9BZH6 1224 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 DNAH12Q6ZR08 3092 aa9.52□□□□□ -0.88
TCF4-241ENST00000568740 SYNRGQ9UMZ2 1314 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 LAD1O00515 517 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 VGLL4Q14135 290 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 TREML2Q5T2D2 321 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 CEP135Q66GS9 1140 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.89
TCF4-241ENST00000568740 CATSPER3Q86XQ3 398 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 DEPDC4Q8N2C3 294 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 LARP4BQ92615 738 aaKnown RBP9.52□□□□□ -0.89
TCF4-241ENST00000568740 OTUD5Q96G74 571 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 TAAR1Q96RJ0 339 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 APBA2Q99767 749 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 IKZF4Q9H2S9 585 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 ELP3Q9H9T3 547 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 FEM1BQ9UK73 627 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 TELO2Q9Y4R8 837 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms