RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 RSPH3Q86UC2 560 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 DBF4BQ8NFT6 615 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 RASGRP4Q8TDF6 673 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 SEPT8Q92599 483 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
CMTM3-215ENST00000568477 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
CMTM3-215ENST00000568477 SH3GLB2Q9NR46 395 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 TRPC6Q9Y210 931 aa16.42■□□□□ 0.22
CMTM3-215ENST00000568477 RRN3P2A6NIE6 340 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 DDX39AO00148 427 aaKnown RBP16.41■□□□□ 0.22
CMTM3-215ENST00000568477 DEXIO95424 95 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 IGFBP4P22692 258 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 STAT5BP51692 787 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 NLRP5P59047 1200 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 IGBP1P78318 339 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 STK3Q13188 491 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 FAM26DQ5JW98 314 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 PLPPR4Q7Z2D5 763 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 RPAINQ86UA6 219 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 CHD7Q9P2D1 2997 aa16.41■□□□□ 0.22
CMTM3-215ENST00000568477 MBLAC1A4D2B0 266 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-215ENST00000568477 IPO5O00410 1097 aaKnown RBP16.4■□□□□ 0.22
CMTM3-215ENST00000568477 BACH1O14867 736 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 ATG7O95352 703 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 GJB5O95377 273 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 CCNE2O96020 404 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 AMHP03971 560 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 INSRRP14616 1297 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 SLC26A2P50443 739 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 ANAPC15P60006 121 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 TAP1Q03518 808 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 PLCB4Q15147 1175 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 FAM160B1Q5W0V3 765 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 TMCO2Q7Z6W1 182 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-215ENST00000568477 USP38Q8NB14 1042 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 ZNF577Q9BSK1 485 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 TBC1D22BQ9NU19 505 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 TCEAL9Q9UHQ7 104 aa16.4■□□□□ 0.22
CMTM3-215ENST00000568477 PTPRSQ13332 1948 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 DLL1O00548 723 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 DHX15O43143 795 aaKnown RBP16.39■□□□□ 0.21
CMTM3-215ENST00000568477 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
CMTM3-215ENST00000568477 ARHGEF15O94989 841 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 RPLP2P05387 115 aaKnown RBP16.39■□□□□ 0.21
CMTM3-215ENST00000568477 CIITAP33076 1130 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 PRR16Q569H4 304 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 MARCH8Q5T0T0 291 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 MIS18BP1Q6P0N0 1132 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 ABHD15Q6UXT9 468 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
CMTM3-215ENST00000568477 PPM1EQ8WY54 764 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 APBB2Q92870 758 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 RAD9AQ99638 391 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 CERS4Q9HA82 394 aa16.39■□□□□ 0.21
CMTM3-215ENST00000568477 IGKV6D-21A0A0A0MT36 114 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 POTEB3A0JP26 581 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 LCHNA4D1U4 455 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 RBAK-RBAKDNI3L0D1 243 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 CDKL5O76039 1030 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 CHRNA1P02708 482 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-215ENST00000568477 FAM117BQ6P1L5 589 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 POTEBQ6S5H4 581 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 MYOCDQ8IZQ8 938 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-215ENST00000568477 DNAJB3Q8WWF6 145 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 ARNTL2Q8WYA1 636 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 UIMC1Q96RL1 719 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 IFIH1Q9BYX4 1025 aaKnown RBP16.38■□□□□ 0.21
CMTM3-215ENST00000568477 C22orf23Q9BZE7 217 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 OSBPL7Q9BZF2 842 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-215ENST00000568477 SLKQ9H2G2 1235 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-215ENST00000568477 PCDHA4Q9UN74 947 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 MICAL3Q7RTP6 2002 aa16.38■□□□□ 0.21
CMTM3-215ENST00000568477 TTC28Q96AY4 2481 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 GTPBP6O43824 516 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-215ENST00000568477 GHRP10912 638 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 MRPS6P82932 125 aaKnown RBP16.37■□□□□ 0.21
CMTM3-215ENST00000568477 KRT76Q01546 638 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 MGAT3Q09327 533 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 ANKRD1Q15327 319 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 ZNF746Q6NUN9 644 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-215ENST00000568477 PDXDC2PQ6P474 469 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 CCDC60Q8IWA6 550 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-215ENST00000568477 ATP8B4Q8TF62 1192 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 TRAPPC12Q8WVT3 735 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 ZNF302Q9NR11 478 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 CDY2AQ9Y6F7 541 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 PRUNE2Q8WUY3 3088 aa16.37■□□□□ 0.21
CMTM3-215ENST00000568477 EYSQ5T1H1 3165 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 PRRC2BQ5JSZ5 2229 aaKnown RBP16.36■□□□□ 0.21
CMTM3-215ENST00000568477 RFXAPO00287 272 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 HBP1O60381 514 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 USP11P51784 963 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 SCRN1Q12765 414 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 LPIN1Q14693 890 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 CCDC85BQ15834 202 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms