RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 KIAA0825Q8IV33 1275 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 FANCBQ8NB91 859 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 GRIN3AQ8TCU5 1115 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 ANKS1AQ92625 1134 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 ZSCAN16Q9H4T2 348 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 CCDC86Q9H6F5 360 aaKnown RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 ZNF277Q9NRM2 450 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 TCP11L1Q9NUJ3 509 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 ORC3Q9UBD5 711 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 ZNRF3Q9ULT6 936 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 TAF1P21675 1872 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 TNS1Q9HBL0 1735 aaKnown RBP7.12□□□□□ -1.27
CAPN3-218ENST00000568153 EP400Q96L91 3159 aa7.12□□□□□ -1.27
CAPN3-218ENST00000568153 RGPD3A6NKT7 1758 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-218ENST00000568153 RGPD4Q7Z3J3 1758 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 ARAP2Q8WZ64 1704 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 NRXN2Q9P2S2 1712 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 SMIM22K7EJ46 135 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 DTNBO60941 627 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 RECKO95980 971 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 FDPSP14324 419 aaKnown RBP7.11□□□□□ -1.27
CAPN3-218ENST00000568153 IARSP41252 1262 aaKnown RBP7.11□□□□□ -1.27
CAPN3-218ENST00000568153 SEC23AQ15436 765 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 MAP3K11Q16584 847 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 TSNAXIP1Q2TAA8 658 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 DGKHQ86XP1 1220 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 NIM1KQ8IY84 436 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 ZNF654Q8IZM8 581 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 ENAHQ8N8S7 591 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-218ENST00000568153 NUP133Q8WUM0 1156 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 JDP2Q8WYK2 163 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 WASF1Q92558 559 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 DYNLL2Q96FJ2 89 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 NOC4LQ9BVI4 516 aaKnown RBP7.11□□□□□ -1.27
CAPN3-218ENST00000568153 CBX8Q9HC52 389 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 LMBRD1Q9NUN5 540 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 HDAC9Q9UKV0 1011 aa7.11□□□□□ -1.27
CAPN3-218ENST00000568153 C10orf71Q711Q0 1435 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 TNKSO95271 1327 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 FLT1P17948 1338 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 MYO3BQ8WXR4 1341 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 YDJCA8MPS7 323 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 ZNF862O60290 1169 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 WDHD1O75717 1129 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 RAD17O75943 681 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 TSPY3P0CV98 308 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 TSPY8P0CW00 308 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 LIG1P18858 919 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 VAMP1P23763 118 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 MMP14P50281 582 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 AKAP17AQ02040 695 aaKnown RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 PICALMQ13492 652 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 TNIP1Q15025 636 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 SLC4A8Q2Y0W8 1093 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 MAP1SQ66K74 1059 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 ATL3Q6DD88 541 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 TTBK2Q6IQ55 1244 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 C16orf86Q6ZW13 317 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 MICU3Q86XE3 530 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 RAB11FIP4Q86YS3 637 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 FOXP4Q8IVH2 680 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 CCDC144CPQ8IYA2 1237 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 ARMC10Q8N2F6 343 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 CRACR2BQ8N4Y2 399 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 TMEM87AQ8NBN3 555 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 WDR89Q96FK6 387 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 FAM46AQ96IP4 442 aaKnown RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 C8orf76Q96K31 380 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 MYL10Q9BUA6 226 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 IDI2Q9BXS1 227 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 EMILIN2Q9BXX0 1053 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 DHX36Q9H2U1 1008 aaKnown RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 KAT14Q9H8E8 782 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 SUGCTQ9HAC7 445 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 RBM28Q9NW13 759 aaKnown RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 SWAP70Q9UH65 585 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 SAMM50Q9Y512 469 aa7.1□□□□□ -1.27
CAPN3-218ENST00000568153 DDX49Q9Y6V7 483 aaKnown RBP7.1□□□□□ -1.27
CAPN3-218ENST00000568153 PSMD14O00487 310 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 DDAH1O94760 285 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 TIAF1O95411 115 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 HLA-DOAP06340 250 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 IFNAR1P17181 557 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 RXRAP19793 462 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 LIG3P49916 1009 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 GNAQP50148 359 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 TRIM29Q14134 588 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 DLGAP5Q15398 846 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 NTRK3Q16288 839 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 CFAP100Q494V2 611 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 ANKRD34AQ69YU3 496 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 FDX2Q6P4F2 183 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 FERMT3Q86UX7 667 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 SMG8Q8ND04 991 aaKnown RBP7.09□□□□□ -1.27
CAPN3-218ENST00000568153 AGBL3Q8NEM8 1001 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 FBXO18Q8NFZ0 1043 aa7.09□□□□□ -1.27
CAPN3-218ENST00000568153 PRMT6Q96LA8 375 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-218ENST00000568153 ZNF396Q96N95 335 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-218ENST00000568153 GMLQ99445 158 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms