RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 TRIP4Q15650 581 aaPredicted RBP8.97□□□□□ -0.97
SMG1-214ENST00000568038 CCL15Q16663 113 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 ASPRV1Q53RT3 343 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 NKAPLQ5M9Q1 402 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 TREML2Q5T2D2 321 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 XP32Q5T750 250 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 CCDC82Q8N4S0 544 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 PIBF1Q8WXW3 757 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 PIK3R5Q8WYR1 880 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 COL26A1Q96A83 441 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 PLD4Q96BZ4 506 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 HHIPL1Q96JK4 782 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 CAPNS2Q96L46 248 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 C12orf42Q96LP6 360 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 TANGO6Q9C0B7 1094 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 UBA5Q9GZZ9 404 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 CPVLQ9H3G5 476 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 RPAP3Q9H6T3 665 aaPredicted RBP8.97□□□□□ -0.97
SMG1-214ENST00000568038 SH2B1Q9NRF2 756 aaPredicted RBP8.97□□□□□ -0.97
SMG1-214ENST00000568038 MAD2L2Q9UI95 211 aa8.97□□□□□ -0.97
SMG1-214ENST00000568038 CCDC196A0A1B0GTZ2 297 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 RASSF10A6NK89 507 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 WDR46O15213 610 aaKnown RBP8.96□□□□□ -0.98
SMG1-214ENST00000568038 DHX16O60231 1041 aaKnown RBP8.96□□□□□ -0.98
SMG1-214ENST00000568038 FLOT1O75955 427 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 PLEKHA8P1O95397 391 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 RCAN1P53805 252 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 ST3GAL1Q11201 340 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 MOGSQ13724 837 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 GPATCH4Q5T3I0 446 aaKnown RBP8.96□□□□□ -0.98
SMG1-214ENST00000568038 FASTKD5Q7L8L6 764 aaKnown RBP8.96□□□□□ -0.98
SMG1-214ENST00000568038 NBPF11Q86T75 865 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 SRBD1Q8N5C6 995 aaKnown RBP8.96□□□□□ -0.98
SMG1-214ENST00000568038 GPR152Q8TDT2 470 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 BRI3BPQ8WY22 251 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 CLP1Q92989 425 aaKnown RBP8.96□□□□□ -0.98
SMG1-214ENST00000568038 GTF3C6Q969F1 213 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 MAP3K14Q99558 947 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 VAT1LQ9HCJ6 419 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 FBXO28Q9NVF7 368 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 RBM28Q9NW13 759 aaKnown RBP8.96□□□□□ -0.98
SMG1-214ENST00000568038 FEM1BQ9UK73 627 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 AGTPBP1Q9UPW5 1226 aa8.96□□□□□ -0.98
SMG1-214ENST00000568038 MANSC4A6NHS7 340 aaPredicted RBP8.95□□□□□ -0.98
SMG1-214ENST00000568038 BTBD19C9JJ37 291 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 DYRK3O43781 588 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 AOC2O75106 756 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 GNAQP50148 359 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 STAT2P52630 851 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 SNAP25P60880 206 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 IRX3P78415 501 aaPredicted RBP8.95□□□□□ -0.98
SMG1-214ENST00000568038 KIF23Q02241 960 aaPredicted RBP8.95□□□□□ -0.98
SMG1-214ENST00000568038 BECN1Q14457 450 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 PPP2R5BQ15173 497 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 SLC35G1Q2M3R5 365 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 CPLX2Q6PUV4 134 aaKnown RBP8.95□□□□□ -0.98
SMG1-214ENST00000568038 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 TMTC3Q6ZXV5 915 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 FAM160B2Q86V87 743 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 Q8N3U1 123 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 CHURC1Q8WUH1 139 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 TTC9Q92623 222 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 RBSNQ9H1K0 784 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 FAM13BQ9NYF5 915 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 STIM2Q9P246 746 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 SEPT3Q9UH03 358 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 PTPRFP10586 1907 aa8.95□□□□□ -0.98
SMG1-214ENST00000568038 hCG_1642624A0A1W2PR95 340 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 PDHXO00330 501 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 CYTH3O43739 400 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 CTDNEP1O95476 244 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 HSP90AA1P07900 732 aaKnown RBP8.94□□□□□ -0.98
SMG1-214ENST00000568038 HSPA6P17066 643 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 HOXA7P31268 230 aaPredicted RBP8.94□□□□□ -0.98
SMG1-214ENST00000568038 SSRP1Q08945 709 aaKnown RBP8.94□□□□□ -0.98
SMG1-214ENST00000568038 NOGQ13253 232 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 COG2Q14746 738 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 NTRK3Q16288 839 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 SYDE2Q5VT97 1194 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 BTNL9Q6UXG8 535 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 HOMER1Q86YM7 354 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 ADGRF4Q8IZF3 695 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 FAM43AQ8N2R8 423 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 IL22RA1Q8N6P7 574 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 PHKBQ93100 1093 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 DDX11Q96FC9 970 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 PTPN18Q99952 460 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 SLF1Q9BQI6 1058 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 LZTS2Q9BRK4 669 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 SLC26A6Q9BXS9 759 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 WDR33Q9C0J8 1336 aaKnown RBP8.94□□□□□ -0.98
SMG1-214ENST00000568038 NID2Q14112 1375 aa8.94□□□□□ -0.98
SMG1-214ENST00000568038 PTPDC1A2A3K4 754 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 IGF2BP3O00425 579 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMG1-214ENST00000568038 ZBTB39O15060 712 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 JAK2O60674 1132 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 PLA2G6O60733 806 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 CDKL5O76039 1030 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 IFNAR1P17181 557 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms