RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ZDHHC15Q96MV8 337 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 ZBTB40Q9NUA8 1239 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 ACTR10Q9NZ32 417 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 PRKAG3Q9UGI9 489 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 TAF6LQ9Y6J9 622 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 ARFGEF1Q9Y6D6 1849 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 C4BP0C0L5 1744 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 PALLDQ8WX93 1383 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 SMAD7O15105 426 aaKnown RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 FGF10O15520 208 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 EFEMP2O95967 443 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 CD3EP07766 207 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 ZNF853P0CG23 659 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 GRB10Q13322 594 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 ADAT2Q7Z6V5 191 aaKnown RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 NLGN1Q8N2Q7 840 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 NAT16Q8N8M0 369 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 ADCY4Q8NFM4 1077 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 TSR2Q969E8 191 aaKnown RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 ABHD8Q96I13 439 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 RCC1LQ96I51 464 aaKnown RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 FGD4Q96M96 766 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 FCRL3Q96P31 734 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 SUSD2Q9UGT4 822 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 NOB1Q9ULX3 412 aaKnown RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 MRVI1Q9Y6F6 885 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 TAF1LQ8IZX4 1826 aa6.47□□□□□ -1.37
CAPN3-217ENST00000567817 SOS1Q07889 1333 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-217ENST00000567817 TSPAN15O95858 294 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 PNLIPP16233 465 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 NUCB1Q02818 461 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 PPP2R5DQ14738 602 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 BMP2KLQ5H9B9 411 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 HLA-DQA1Q5Y7H0 255 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 UBR3Q6ZT12 1888 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 SYDE1Q6ZW31 735 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-217ENST00000567817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.46□□□□□ -1.38
CAPN3-217ENST00000567817 TMEM52Q8NDY8 209 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 ZCRB1Q8TBF4 217 aaKnown RBP6.46□□□□□ -1.38
CAPN3-217ENST00000567817 GMLQ99445 158 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 PLCD4Q9BRC7 762 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 CHMP4AQ9BY43 222 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 KIAA1551Q9HCM1 1747 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 RNF181Q9P0P0 153 aa6.46□□□□□ -1.38
CAPN3-217ENST00000567817 CGGBP1Q9UFW8 167 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-217ENST00000567817 LAS1LQ9Y4W2 734 aaKnown RBP6.46□□□□□ -1.38
CAPN3-217ENST00000567817 CNTNAP1P78357 1384 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 BRCA1P38398 1863 aaKnown RBP6.45□□□□□ -1.38
CAPN3-217ENST00000567817 TOGARAM1Q9Y4F4 1720 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 KDM6AO15550 1401 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-217ENST00000567817 LTN1O94822 1766 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 OR14I1A6ND48 311 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 GLTPD2A6NH11 291 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 FOXN1O15353 648 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 VAMP4O75379 141 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 MMP10P09238 476 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 IFNGR1P15260 489 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 PTMSP20962 102 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 DNAJA1P31689 397 aaKnown RBP6.45□□□□□ -1.38
CAPN3-217ENST00000567817 PDE6BP35913 854 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 RCSD1Q6JBY9 416 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 MCF2L2Q86YR7 1114 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 ARHGEF39Q8N4T4 335 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 CRACR2BQ8N4Y2 399 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-217ENST00000567817 TMEM57Q8N5G2 664 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 SUGT1Q9Y2Z0 365 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 ABCC4O15439 1325 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 PTPRCP08575 1304 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 MON2Q7Z3U7 1717 aa6.45□□□□□ -1.38
CAPN3-217ENST00000567817 VIRMAQ69YN4 1812 aaKnown RBP6.44□□□□□ -1.38
CAPN3-217ENST00000567817 HRKO00198 91 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 AURKAO14965 403 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 HTATSF1O43719 755 aaKnown RBP6.44□□□□□ -1.38
CAPN3-217ENST00000567817 PEX10O60683 326 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ETFBP38117 255 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ARL4AP40617 200 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 GALK1P51570 392 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 AMPD2Q01433 879 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 LAPTM5Q13571 262 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ZNF124Q15973 351 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 TWISTNBQ3B726 338 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-217ENST00000567817 DALRD3Q5D0E6 543 aaKnown RBP6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ADGRF1Q5T601 910 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 EEF1DP3Q658K8 133 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 CHD1LQ86WJ1 897 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 SKAP1Q86WV1 359 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 SIRT2Q8IXJ6 389 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ZNF513Q8N8E2 541 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-217ENST00000567817 IP6K1Q92551 441 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 PTCHD1Q96NR3 888 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 APBA2Q99767 749 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 C22orf23Q9BZE7 217 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ZNF552Q9H707 407 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 BABAM1Q9NWV8 329 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 ACSL6Q9UKU0 697 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 PCDH11XQ9BZA7 1347 aa6.44□□□□□ -1.38
CAPN3-217ENST00000567817 PCDH11YQ9BZA8 1340 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms