RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 BTBD18B2RXH4 712 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 PRPF3O43395 683 aaKnown RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 MMP1P03956 469 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 GOLGA8HP0CJ92 632 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 TOB1P50616 345 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 EIF6P56537 245 aaKnown RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 GRM2Q14416 872 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 CPLX2Q6PUV4 134 aaKnown RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 DGKHQ86XP1 1220 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 LRRC47Q8N1G4 583 aaKnown RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 TMEM102Q8N9M5 508 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 KAT14Q9H8E8 782 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 RBM28Q9NW13 759 aaKnown RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 SERPINB13Q9UIV8 391 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 RCOR1Q9UKL0 485 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 ZNRF3Q9ULT6 936 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 STX8Q9UNK0 236 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 SCAF8Q9UPN6 1271 aaKnown RBP6.6□□□□□ -1.35
SF3B3-210ENST00000567654 KIF3AQ9Y496 699 aa6.6□□□□□ -1.35
SF3B3-210ENST00000567654 ASTN2O75129 1339 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 MYO3BQ8WXR4 1341 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 ZNF541Q9H0D2 1346 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 A0A0A0MRY4 1105 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 TCP10L2B9ZVM9 353 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 CALM1P0DP23 149 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 CALM2P0DP24 149 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 CALM3P0DP25 149 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 XRCC6P12956 609 aaKnown RBP eCLIP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 PTPRAP18433 802 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 U2AF2P26368 475 aaKnown RBP eCLIP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 NASPP49321 788 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 GSK3AP49840 483 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 PTPAQ15257 358 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 GRIK4Q16099 956 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 EAPPQ56P03 285 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 KIAA0319Q5VV43 1072 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 NXPE4Q6UWF7 544 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 NIM1KQ8IY84 436 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 DIS3L2Q8IYB7 885 aaKnown RBP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 LINC00301Q8NCQ3 95 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 GLIS3Q8NEA6 775 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 CTCFLQ8NI51 663 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 ZBED3Q96IU2 234 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 MAP3K14Q99558 947 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 FUCA2Q9BTY2 467 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 PHF20Q9BVI0 1012 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 BCO2Q9BYV7 579 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 SCAND2PQ9GZW5 306 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-210ENST00000567654 MTMR4Q9NYA4 1195 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 RTEL1Q9NZ71 1219 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 PGAP2Q9UHJ9 254 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 CD2APQ9Y5K6 639 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 MRVI1Q9Y6F6 885 aa6.59□□□□□ -1.35
SF3B3-210ENST00000567654 LCTP09848 1927 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 DOCK5Q9H7D0 1870 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 FRMPD2Q68DX3 1309 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 CCDC196A0A1B0GTZ2 297 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 GOLGA6L3A6NEY3 463 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 ENTPD3O75355 529 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 DEAF1O75398 565 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 GDF11O95390 407 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 HLA-DOAP06340 250 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 PDHBP11177 359 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 TOP1P11387 765 aaKnown RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 ATP2B2Q01814 1243 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 GRIN1Q05586 938 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 SF3A1Q15459 793 aaKnown RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 PFKFB3Q16875 520 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 NBPF9Q3BBW0 867 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 CCDC183Q5T5S1 534 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 ANO1Q5XXA6 986 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 WWC2Q6AWC2 1192 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 CIAPIN1Q6FI81 312 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 TATDN1Q6P1N9 297 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 LRSAM1Q6UWE0 723 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 BRAPQ7Z569 592 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 METTL16Q86W50 562 aaKnown RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 SIAH1Q8IUQ4 282 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 CCNJLQ8IV13 435 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 RGS22Q8NE09 1264 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF396Q96N95 335 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 DUSP9Q99956 384 aaKnown RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 OSBPL7Q9BZF2 842 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 BHLHE41Q9C0J9 482 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 VPS33BQ9H267 617 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 GRPEL1Q9HAV7 217 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF70Q9UC06 446 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-210ENST00000567654 SWAP70Q9UH65 585 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 CFAP45Q9UL16 551 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 PCDHA7Q9UN72 937 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 KIAA1217Q5T5P2 1943 aa6.58□□□□□ -1.36
SF3B3-210ENST00000567654 LOC285556D6RIA3 1793 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 LTBP3Q9NS15 1303 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 A0A096LPE4 126 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 A0A1W2PPZ6 126 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms