RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NIPA1Q7RTP0 329 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 PLPPR4Q7Z2D5 763 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 RAB11FIP4Q86YS3 637 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 MRPL38Q96DV4 380 aaKnown RBP21.23■□□□□ 0.99
LINC01238-205ENST00000567549 IL17RAQ96F46 866 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 FTHL17Q9BXU8 183 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 PKD2L1Q9P0L9 805 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 NAP1L2Q9ULW6 460 aaPredicted RBP21.23■□□□□ 0.99
LINC01238-205ENST00000567549 TRPC6Q9Y210 931 aa21.23■□□□□ 0.99
LINC01238-205ENST00000567549 KLF18A0A0U1RQI7 1052 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 GSTTP1A0A1W2PQM5 241 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 SMCO2A6NFE2 343 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 PUS10Q3MIT2 529 aaKnown RBP21.22■□□□□ 0.99
LINC01238-205ENST00000567549 ODR4Q5SWX8 454 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 FAM160B1Q5W0V3 765 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 TSHZ1Q6ZSZ6 1077 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 FIBCD1Q8N539 461 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 ANO3Q9BYT9 981 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 FAM50BQ9Y247 325 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 V9GY48 417 aaPredicted RBP21.22■□□□□ 0.99
LINC01238-205ENST00000567549 RALGAPA2Q2PPJ7 1873 aa21.22■□□□□ 0.99
LINC01238-205ENST00000567549 TCF20Q9UGU0 1960 aaKnown RBP21.21■□□□□ 0.99
LINC01238-205ENST00000567549 NCK2O43639 380 aa21.21■□□□□ 0.99
LINC01238-205ENST00000567549 GHRP10912 638 aa21.21■□□□□ 0.99
LINC01238-205ENST00000567549 METAP2P50579 478 aaKnown RBP eCLIP21.21■□□□□ 0.99
LINC01238-205ENST00000567549 STAT5BP51692 787 aa21.21■□□□□ 0.99
LINC01238-205ENST00000567549 KCNQ1P51787 676 aa21.21■□□□□ 0.99
LINC01238-205ENST00000567549 AKAP17AQ02040 695 aaKnown RBP21.21■□□□□ 0.99
LINC01238-205ENST00000567549 EPC2Q52LR7 807 aa21.21■□□□□ 0.99
LINC01238-205ENST00000567549 KRT40Q6A162 431 aa21.21■□□□□ 0.99
LINC01238-205ENST00000567549 NME8Q8N427 588 aa21.21■□□□□ 0.99
LINC01238-205ENST00000567549 H3BNC9 293 aa21.2■□□□□ 0.98
LINC01238-205ENST00000567549 CHRNA1P02708 482 aa21.2■□□□□ 0.98
LINC01238-205ENST00000567549 RB1P06400 928 aa21.2■□□□□ 0.98
LINC01238-205ENST00000567549 SREBF1P36956 1147 aa21.2■□□□□ 0.98
LINC01238-205ENST00000567549 MRPS6P82932 125 aaKnown RBP21.2■□□□□ 0.98
LINC01238-205ENST00000567549 TMEM192Q8IY95 271 aa21.2■□□□□ 0.98
LINC01238-205ENST00000567549 C17orf80Q9BSJ5 609 aa21.2■□□□□ 0.98
LINC01238-205ENST00000567549 C11orf84Q9BUA3 381 aaPredicted RBP21.2■□□□□ 0.98
LINC01238-205ENST00000567549 C6orf50Q9HD87 102 aa21.2■□□□□ 0.98
LINC01238-205ENST00000567549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.19■□□□□ 0.98
LINC01238-205ENST00000567549 STXBP3O00186 592 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 REC8O95072 547 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 INSRRP14616 1297 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 PSMA5P28066 241 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 GNA11P29992 359 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 ACTR2P61160 394 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 IGBP1P78318 339 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 SETQ01105 290 aaPredicted RBP21.19■□□□□ 0.98
LINC01238-205ENST00000567549 GPM6BQ13491 265 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 BICD2Q8TD16 824 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 DNAJB3Q8WWF6 145 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 LMAN2LQ9H0V9 348 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 UBE2ZQ9H832 354 aaPredicted RBP21.19■□□□□ 0.98
LINC01238-205ENST00000567549 CDY2AQ9Y6F7 541 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 NLRC5Q86WI3 1866 aa21.19■□□□□ 0.98
LINC01238-205ENST00000567549 ESYT2A0FGR8 921 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 POTEB3A0JP26 581 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 MEIS1O00470 390 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 STAG3L1P0CL83 205 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 MGAT3Q09327 533 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 LPIN1Q14693 890 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 FBXO47Q5MNV8 452 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 MIS18BP1Q6P0N0 1132 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 BLOC1S2Q6QNY1 142 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 POTEBQ6S5H4 581 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 RUFY4Q6ZNE9 571 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 CCDC148Q8NFR7 591 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 BRPF3Q9ULD4 1205 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 PCDHA2Q9Y5H9 948 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 TRPV2Q9Y5S1 764 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 ADGRA3Q8IWK6 1321 aa21.18■□□□□ 0.98
LINC01238-205ENST00000567549 SMIM35A0A1B0GVV1 85 aa21.17■□□□□ 0.98
LINC01238-205ENST00000567549 BACH1O14867 736 aa21.17■□□□□ 0.98
LINC01238-205ENST00000567549 HBP1O60381 514 aa21.17■□□□□ 0.98
LINC01238-205ENST00000567549 SCG2P13521 617 aa21.17■□□□□ 0.98
LINC01238-205ENST00000567549 PFKFB3Q16875 520 aaPredicted RBP21.17■□□□□ 0.98
LINC01238-205ENST00000567549 SPRED2Q7Z698 418 aa21.17■□□□□ 0.98
LINC01238-205ENST00000567549 PPP2R3CQ969Q6 453 aa21.17■□□□□ 0.98
LINC01238-205ENST00000567549 AGO4Q9HCK5 861 aaKnown RBP21.17■□□□□ 0.98
LINC01238-205ENST00000567549 TBC1D22BQ9NU19 505 aa21.17■□□□□ 0.98
LINC01238-205ENST00000567549 SPTBN5Q9NRC6 3674 aaKnown RBP21.16■□□□□ 0.98
LINC01238-205ENST00000567549 COL1A2P08123 1366 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 CTNNB1P35222 781 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 CLK2P49760 499 aaKnown RBP21.16■□□□□ 0.98
LINC01238-205ENST00000567549 FUT2Q10981 343 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 PAK2Q13177 524 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 LEXMQ3ZCV2 418 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 REXO1Q8N1G1 1221 aaKnown RBP21.16■□□□□ 0.98
LINC01238-205ENST00000567549 BANK1Q8NDB2 785 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 TCEANC2Q96MN5 208 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 PLVAPQ9BX97 442 aa21.16■□□□□ 0.98
LINC01238-205ENST00000567549 FAM49AQ9H0Q0 323 aaPredicted RBP21.16■□□□□ 0.98
LINC01238-205ENST00000567549 NSUN3Q9H649 340 aaKnown RBP21.16■□□□□ 0.98
LINC01238-205ENST00000567549 KDM3AQ9Y4C1 1321 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.15■□□□□ 0.98
LINC01238-205ENST00000567549 C5orf67F2Z3F1 127 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 ATG7O95352 703 aa21.15■□□□□ 0.98
LINC01238-205ENST00000567549 BTG3Q14201 252 aaPredicted RBP21.15■□□□□ 0.98
LINC01238-205ENST00000567549 PLCB4Q15147 1175 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms