RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 ELP1O95163 1332 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 ATG7O95352 703 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 TIMP1P01033 207 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 OR52Z1P0C646 297 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 DDIT3P35638 169 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 IRX5P78411 483 aaPredicted RBP18.84■□□□□ 0.61
CLN6-208ENST00000567060 PPP2R5CQ13362 524 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 HSDL1Q3SXM5 330 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 ARL6IP4Q66PJ3 421 aaKnown RBP18.84■□□□□ 0.61
CLN6-208ENST00000567060 FERMT3Q86UX7 667 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 TIFAQ96CG3 184 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 ZNF396Q96N95 335 aaPredicted RBP18.84■□□□□ 0.61
CLN6-208ENST00000567060 GPR20Q99678 358 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 TBX21Q9UL17 535 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 STK24Q9Y6E0 443 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 REV3LO60673 3130 aa18.84■□□□□ 0.61
CLN6-208ENST00000567060 GRXCR1A8MXD5 290 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 DCDC2CA8MYV0 355 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 WDR64B1ANS9 1081 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 TNFRSF10AO00220 468 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 ATP2B1P20020 1258 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 PBX2P40425 430 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 SLC26A2P50443 739 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 CDK7P50613 346 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 ZNF174Q15697 407 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 KCNA10Q16322 511 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 TMEM63BQ5T3F8 832 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 B3GNT9Q6UX72 402 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 HAS1Q92839 578 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 TNPO1Q92973 898 aaKnown RBP18.83■□□□□ 0.6
CLN6-208ENST00000567060 GLT1D1Q96MS3 346 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 MTG1Q9BT17 334 aaPredicted RBP18.83■□□□□ 0.6
CLN6-208ENST00000567060 RAB34Q9BZG1 259 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 STARD7Q9NQZ5 370 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 PCDHA12Q9UN75 941 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 PCDHB6Q9Y5E3 794 aa18.83■□□□□ 0.6
CLN6-208ENST00000567060 EMSYQ7Z589 1322 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 MYADML2A6NDP7 307 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 ASGR1P07306 291 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 COL9A1P20849 921 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 ACTR2P61160 394 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 ATP2C1P98194 919 aaPredicted RBP18.82■□□□□ 0.6
CLN6-208ENST00000567060 PURAQ00577 322 aaKnown RBP18.82■□□□□ 0.6
CLN6-208ENST00000567060 TMEM266Q2M3C6 531 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 TMEM240Q5SV17 173 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 RASIP1Q5U651 963 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 MFSD5Q6N075 450 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 MIS18BP1Q6P0N0 1132 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 PKD2L1Q9P0L9 805 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 ZNF215Q9UL58 517 aaPredicted RBP18.82■□□□□ 0.6
CLN6-208ENST00000567060 PCDHA10Q9Y5I2 948 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 MYO9BQ13459 2157 aa18.82■□□□□ 0.6
CLN6-208ENST00000567060 WNT7AO00755 349 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 DKC1O60832 514 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLN6-208ENST00000567060 LGR5O75473 907 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 F2P00734 622 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 PSAPP07602 524 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 BEX3Q00994 111 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 PTGDRQ13258 359 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 FAM160B1Q5W0V3 765 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 C4orf32Q8N8J7 132 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 AFAP1L1Q8TED9 768 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 IPO9Q96P70 1041 aaKnown RBP18.81■□□□□ 0.6
CLN6-208ENST00000567060 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 SMARCAD1Q9H4L7 1026 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 AZI2Q9H6S1 392 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 TTC12Q9H892 705 aaPredicted RBP18.81■□□□□ 0.6
CLN6-208ENST00000567060 DOCK5Q9H7D0 1870 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 SCN10AQ9Y5Y9 1956 aa18.81■□□□□ 0.6
CLN6-208ENST00000567060 MYH15Q9Y2K3 1946 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 IGKV6D-21A0A0A0MT36 114 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 GSTTP1A0A1W2PQM5 241 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 TCF7P36402 384 aaPredicted RBP18.8■□□□□ 0.6
CLN6-208ENST00000567060 FXR2P51116 673 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLN6-208ENST00000567060 PDIA5Q14554 519 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 ABHD15Q6UXT9 468 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 PLPPR4Q7Z2D5 763 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 NEK9Q8TD19 979 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 DISC1Q9NRI5 854 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 RAPGEFL1Q9UHV5 662 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 VAV3Q9UKW4 847 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 CFAP45Q9UL16 551 aa18.8■□□□□ 0.6
CLN6-208ENST00000567060 CCNE2O96020 404 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 LGALS2P05162 132 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 MYL3P08590 195 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 SUPT20HL2P0C7V6 817 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 PTPN11Q06124 597 aaPredicted RBP18.79■□□□□ 0.6
CLN6-208ENST00000567060 MIER3Q7Z3K6 550 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 PPM1EQ8WY54 764 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 C16orf70Q9BSU1 422 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 TMEM60Q9H2L4 133 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 UNC45AQ9H3U1 944 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 PRDM12Q9H4Q4 367 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 ERAP1Q9NZ08 941 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 BDP1A6H8Y1 2624 aa18.79■□□□□ 0.6
CLN6-208ENST00000567060 MROH7Q68CQ1 1323 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 NCOR1O75376 2440 aa18.78■□□□□ 0.6
CLN6-208ENST00000567060 A0A0U1RQG5 324 aaPredicted RBP18.78■□□□□ 0.6
CLN6-208ENST00000567060 H3BRB1 525 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms