RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 HAUS2Q9NVX0 235 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 RGS17Q9UGC6 210 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 PGRMC1O00264 195 aaKnown RBP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 TRAF5O00463 557 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 CEP104O60308 925 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 PDHBP11177 359 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 ERCC3P19447 782 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 SMARCA1P28370 1054 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 COASYQ13057 564 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 CALCRLQ16602 461 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 SPDYCQ5MJ68 293 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 DYNLL2Q96FJ2 89 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 SLITRK6Q9H5Y7 841 aa17.16■□□□□ 0.34
COMMD4-215ENST00000566843 NOVA2Q9UNW9 492 aaKnown RBP17.16■□□□□ 0.34
COMMD4-215ENST00000566843 MGRN1O60291 552 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 PRDX5P30044 214 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 FLT3P36888 993 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 TMEM266Q2M3C6 531 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 KCNK18Q7Z418 384 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 TMC3Q7Z5M5 1100 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 FAM133AQ8N9E0 248 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 TLCD1Q96CP7 247 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 CNOT10Q9H9A5 744 aaKnown RBP17.15■□□□□ 0.34
COMMD4-215ENST00000566843 VEZTQ9HBM0 779 aa17.15■□□□□ 0.34
COMMD4-215ENST00000566843 BCCIPQ9P287 314 aaKnown RBP eCLIP17.15■□□□□ 0.34
COMMD4-215ENST00000566843 SOGA3Q5TF21 947 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 GKAP1Q5VSY0 366 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-215ENST00000566843 DPY19L2P1Q6NXN4 242 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 IRF2BP2Q7Z5L9 587 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 METTL13Q8N6R0 699 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 UBLCP1Q8WVY7 318 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-215ENST00000566843 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 STXBP5LQ9Y2K9 1186 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 NOC2LQ9Y3T9 749 aaKnown RBP17.14■□□□□ 0.33
COMMD4-215ENST00000566843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.14■□□□□ 0.33
COMMD4-215ENST00000566843 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 F8VZ95 297 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 EDIL3O43854 480 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 GOLGA8HP0CJ92 632 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 TSPY3P0CV98 308 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 TSPY8P0CW00 308 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 RXRBP28702 533 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 SLFN11Q7Z7L1 901 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 NUDT12Q9BQG2 462 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 RAB34Q9BZG1 259 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
COMMD4-215ENST00000566843 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 TAF1P21675 1872 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 PPIP5K2O43314 1243 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 KLRK1P26718 216 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 SLC8A1P32418 973 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 ODF2Q5BJF6 829 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 FAM26FQ5R3K3 315 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 TLDC1Q6P9B6 456 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 C3orf67Q6ZVT6 689 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 REXO1Q8N1G1 1221 aaKnown RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 LINC00116Q8NCU8 138 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 N4BP2L2Q92802 583 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 MAGOHBQ96A72 148 aaKnown RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 MIEF2Q96C03 454 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 HVCN1Q96D96 273 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 TXLNGYQ9BZA5 131 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 FAM114A2Q9NRY5 505 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 BRWD3Q6RI45 1802 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 DAPK3O43293 454 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 ANXA13P27216 316 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 NBPF9Q3BBW0 867 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 ERMARDQ5T6L9 678 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 KRT79Q5XKE5 535 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 POTEAQ6S8J7 498 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 ZNF571Q7Z3V5 609 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 TPCN2Q8NHX9 752 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 PSMD1Q99460 953 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 AP1M1Q9BXS5 423 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 DDX47Q9H0S4 455 aaKnown RBP17.13■□□□□ 0.33
COMMD4-215ENST00000566843 ATP6V0A4Q9HBG4 840 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 PCDHA2Q9Y5H9 948 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 BTAF1O14981 1849 aa17.13■□□□□ 0.33
COMMD4-215ENST00000566843 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 SLC37A4O43826 429 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 TRIM37O94972 964 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 EIF3BP55884 814 aaKnown RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 ARID5AQ03989 594 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 PTK2Q05397 1052 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 FAM196AQ6ZSG2 479 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 CCDC26Q8TAB7 109 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
COMMD4-215ENST00000566843 FAM129AQ9BZQ8 928 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 CPVLQ9H3G5 476 aa17.12■□□□□ 0.33
COMMD4-215ENST00000566843 PANK4Q9NVE7 773 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms