RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 CYP3A4P08684 503 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 ZSCAN20P17040 1043 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 PDE4CQ08493 712 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 TBC1D8BQ0IIM8 1120 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 MIIPQ5JXC2 388 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 DYMQ7RTS9 669 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 SLC10A4Q96EP9 437 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 REXO2Q9Y3B8 237 aaKnown RBP11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 A0A0G2JLL6 359 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 MRPS9P82933 396 aaKnown RBP11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 SPIRE1Q08AE8 756 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 RAD51AP2Q09MP3 1159 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 PRRT2Q7Z6L0 340 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 RETREG2Q8NC44 543 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 NUP58Q9BVL2 599 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 POLD4Q9HCU8 107 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 RGL1Q9NZL6 768 aa11.98□□□□□ -0.49
PDXDC1-214ENST00000566633 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 NKRFO15226 690 aaKnown RBP eCLIP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 PSMC6P62333 389 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 EHHADHQ08426 723 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 TUBB2AQ13885 445 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 MCTP2Q6DN12 878 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 MOXD1Q6UVY6 613 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 TRMT1LQ7Z2T5 733 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 SLFN12Q8IYM2 578 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 GUF1Q8N442 669 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 GPR161Q8N6U8 529 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 NAP1L4Q99733 375 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 TUBB2BQ9BVA1 445 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 NOC4LQ9BVI4 516 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 LRRC27Q9C0I9 530 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 ASCC2Q9H1I8 757 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 MYO1AQ9UBC5 1043 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 CDC23Q9UJX2 597 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 CENPFP49454 3210 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 CTAGE9A4FU28 777 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 CELF2O95319 508 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 CYP2C8P10632 490 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 MEA1Q16626 185 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 TSR1Q2NL82 804 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 LDLRAD1Q5T700 205 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 ARHGEF16Q5VV41 709 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 CATSPER3Q86XQ3 398 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 SLC35F6Q8N357 371 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 DDX12PQ92771 950 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 ERGIC2Q96RQ1 377 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 ZNF577Q9BSK1 485 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 EPC1Q9H2F5 836 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 TXNRD2Q9NNW7 524 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 AGPAT5Q9NUQ2 364 aa11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 ARGLU1Q9NWB6 273 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-214ENST00000566633 ZBTB39O15060 712 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 ZRANB2O95218 330 aaKnown RBP eCLIP11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 KLK7P49862 253 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 PSMD2Q13200 908 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 BMS1Q14692 1282 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 PGM5Q15124 567 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 Q3C1V9 767 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 LRCH2Q5VUJ6 765 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 LBX2Q6XYB7 198 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 KRT222Q8N1A0 295 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 RABGGTAQ92696 567 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 A1CFQ9NQ94 594 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 KCNH7Q9NS40 1196 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 VAV3Q9UKW4 847 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.49
PDXDC1-214ENST00000566633 PHIPQ8WWQ0 1821 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 TESPA1A2RU30 521 aaPredicted RBP11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 SORBS3O60504 671 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 TRIM21P19474 475 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 ZBED6P86452 979 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 CNTN2Q02246 1040 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 FSTL1Q12841 308 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 MOGSQ13724 837 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 CTTNQ14247 550 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 FIGNQ5HY92 759 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 HYIQ5T013 277 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 OTOP1Q7RTM1 612 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 SRGAP1Q7Z6B7 1085 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.5
PDXDC1-214ENST00000566633 NPHP3-ACAD11A0A0J9YXS1 232 aa11.95□□□□□ -0.5
PDXDC1-214ENST00000566633 IPO5O00410 1097 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-214ENST00000566633 CXCL11O14625 94 aa11.95□□□□□ -0.5
PDXDC1-214ENST00000566633 IDEP14735 1019 aa11.95□□□□□ -0.5
PDXDC1-214ENST00000566633 HERVK_113P62684 666 aa11.95□□□□□ -0.5
PDXDC1-214ENST00000566633 PPIL2Q13356 520 aa11.95□□□□□ -0.5
PDXDC1-214ENST00000566633 TEX35Q5T0J7 233 aa11.95□□□□□ -0.5
PDXDC1-214ENST00000566633 GOLGA1Q92805 767 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms