RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 VPS41P49754 854 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 HNRNPH2P55795 449 aaKnown RBP12.64□□□□□ -0.39
CDH1-210ENST00000566612 ORC2Q13416 577 aaPredicted RBP12.64□□□□□ -0.39
CDH1-210ENST00000566612 BCAS4Q8TDM0 211 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 CEP63Q96MT8 703 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 SEMA6BQ9H3T3 888 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 PPANQ9NQ55 473 aaKnown RBP12.64□□□□□ -0.39
CDH1-210ENST00000566612 TMOD4Q9NZQ9 345 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 LRRC37A3O60309 1634 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 TRIM49P0CI25 452 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 TRIM49CP0CI26 452 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 FERP16591 822 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 STRN3Q13033 797 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 POMGNT1Q8WZA1 660 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 KCNQ5Q9NR82 932 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 SUGT1Q9Y2Z0 365 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 USP14P54578 494 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 PHLDB2Q86SQ0 1253 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 MS4A14Q96JA4 679 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 ASIC3Q9UHC3 531 aa12.64□□□□□ -0.39
CDH1-210ENST00000566612 ABCB11O95342 1321 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 GBP2P32456 591 aaPredicted RBP12.63□□□□□ -0.39
CDH1-210ENST00000566612 PDXDC1Q6P996 788 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 MCF2L2Q86YR7 1114 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 GOLGA5Q8TBA6 731 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 KCNK9Q9NPC2 374 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 KDM3BQ7LBC6 1761 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 H2AFXP16104 143 aaPredicted RBP12.63□□□□□ -0.39
CDH1-210ENST00000566612 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDH1-210ENST00000566612 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 KSR1Q8IVT5 923 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 MRRFQ96E11 262 aaKnown RBP12.63□□□□□ -0.39
CDH1-210ENST00000566612 PNKPQ96T60 521 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 REEP2Q9BRK0 252 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 ESYT2A0FGR8 921 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 ANO9A1A5B4 782 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
CDH1-210ENST00000566612 SLC9A1P19634 815 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 LRRC1Q9BTT6 524 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 RAVER2Q9HCJ3 691 aaKnown RBP12.63□□□□□ -0.39
CDH1-210ENST00000566612 DNAJC12Q9UKB3 198 aa12.63□□□□□ -0.39
CDH1-210ENST00000566612 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
CDH1-210ENST00000566612 ADAMTS3O15072 1205 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 EPHB4P54760 987 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 PEX3P56589 373 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 STRIP1Q5VSL9 837 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 HOOK3Q86VS8 718 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 ZFPM1Q8IX07 1006 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 SPATA4Q8NEY3 305 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 RIN2Q8WYP3 895 aaPredicted RBP12.62□□□□□ -0.39
CDH1-210ENST00000566612 CAPS2Q9BXY5 557 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 RASSF4Q9H2L5 321 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 RIOX1Q9H6W3 641 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 LRRC4BQ9NT99 713 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 STIM2Q9P246 746 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 RGPD5Q99666 1765 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 MYBP10242 640 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 IL1R1P14778 569 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 BBXQ8WY36 941 aaPredicted RBP12.62□□□□□ -0.39
CDH1-210ENST00000566612 PRR12Q9ULL5 1215 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 ACTN2P35609 894 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 GCLMP48507 274 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 PROCA1Q8NCQ7 364 aaPredicted RBP12.62□□□□□ -0.39
CDH1-210ENST00000566612 KIAA0895Q8NCT3 520 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 CEP170P1Q96L14 293 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 HSD3B7Q9H2F3 369 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 GOLPH3Q9H4A6 298 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 GINS2Q9Y248 185 aa12.62□□□□□ -0.39
CDH1-210ENST00000566612 IPO5O00410 1097 aaKnown RBP12.61□□□□□ -0.39
CDH1-210ENST00000566612 HGSO14964 777 aaPredicted RBP12.61□□□□□ -0.39
CDH1-210ENST00000566612 GGCXP38435 758 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 DDR1Q08345 913 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 ZC2HC1CQ53FD0 456 aaPredicted RBP12.61□□□□□ -0.39
CDH1-210ENST00000566612 CATSPER3Q86XQ3 398 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 DUSP9Q99956 384 aaKnown RBP12.61□□□□□ -0.39
CDH1-210ENST00000566612 NYAP2Q9P242 653 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 SNX12Q9UMY4 172 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 E7EVH7 732 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 PGRMC1O00264 195 aaKnown RBP12.61□□□□□ -0.39
CDH1-210ENST00000566612 ABL1P00519 1130 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 LMNB1P20700 586 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 SMARCA1P28370 1054 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 CCT5P48643 541 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 MNAT1P51948 309 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 RHBDL3P58872 404 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 DMP1Q13316 513 aaPredicted RBP12.61□□□□□ -0.39
CDH1-210ENST00000566612 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
CDH1-210ENST00000566612 MTRQ99707 1265 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms