RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 TPH2Q8IWU9 490 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 SCFD1Q8WVM8 642 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 EEF2KMTQ96G04 330 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 ZNF341Q9BYN7 854 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 IFIH1Q9BYX4 1025 aaKnown RBP14.74□□□□□ -0.05
LINC00563-201ENST00000566370 KIAA1683Q9H0B3 1180 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 KCTD10Q9H3F6 313 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 AS3MTQ9HBK9 375 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 ODF2LQ9ULJ1 636 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 PCDHA2Q9Y5H9 948 aa14.74□□□□□ -0.05
LINC00563-201ENST00000566370 MEIS1O00470 390 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 GCNT3O95395 438 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 BCRP11274 1271 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 ZNF280AP59817 542 aaPredicted RBP14.73□□□□□ -0.05
LINC00563-201ENST00000566370 HERVK_113P62684 666 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 CYP4A11Q02928 519 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 ALCAMQ13740 583 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 RASA3Q14644 834 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 TDRD12Q587J7 1177 aaKnown RBP14.73□□□□□ -0.05
LINC00563-201ENST00000566370 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
LINC00563-201ENST00000566370 RSRC2Q7L4I2 434 aaKnown RBP14.73□□□□□ -0.05
LINC00563-201ENST00000566370 HS2ST1Q7LGA3 356 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 OTOP1Q7RTM1 612 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 CCDC43Q96MW1 224 aaKnown RBP14.73□□□□□ -0.05
LINC00563-201ENST00000566370 MXRA8Q9BRK3 442 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 LSM14BQ9BX40 385 aaKnown RBP14.73□□□□□ -0.05
LINC00563-201ENST00000566370 DAAM1Q9Y4D1 1078 aa14.73□□□□□ -0.05
LINC00563-201ENST00000566370 RBBP6Q7Z6E9 1792 aaKnown RBP14.72□□□□□ -0.05
LINC00563-201ENST00000566370 NPHP3-ACAD11A0A0J9YXS1 232 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 ARHGEF35A5YM69 484 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 LRRC53A6NM62 1247 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 AFPP02771 609 aaKnown RBP14.72□□□□□ -0.05
LINC00563-201ENST00000566370 SERPING1P05155 500 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 XRCC5P13010 732 aaKnown RBP14.72□□□□□ -0.05
LINC00563-201ENST00000566370 PTGER2P43116 358 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 KLK7P49862 253 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 HSD17B4P51659 736 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 KIF11P52732 1056 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 RAD51AP2Q09MP3 1159 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 GPS2Q13227 327 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 ARSHQ5FYA8 562 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 SMAP1Q8IYB5 467 aaPredicted RBP14.72□□□□□ -0.05
LINC00563-201ENST00000566370 IRX2Q9BZI1 471 aaPredicted RBP14.72□□□□□ -0.05
LINC00563-201ENST00000566370 PARVGQ9HBI0 331 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 ARFGAP3Q9NP61 516 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 PCDHB13Q9Y5F0 798 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 SAR1BQ9Y6B6 198 aa14.72□□□□□ -0.05
LINC00563-201ENST00000566370 BZW2Q9Y6E2 419 aaKnown RBP14.72□□□□□ -0.05
LINC00563-201ENST00000566370 FRMPD4Q14CM0 1322 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 FER1L6Q2WGJ9 1857 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 SHTN1A0MZ66 631 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 CHMP2AO43633 222 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 LCA5LO95447 670 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 EIF4A3P38919 411 aaKnown RBP14.71□□□□□ -0.05
LINC00563-201ENST00000566370 CLCN6P51797 869 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
LINC00563-201ENST00000566370 NFIL3Q16649 462 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 EPM2AIP1Q7L775 607 aaPredicted RBP14.71□□□□□ -0.05
LINC00563-201ENST00000566370 MIER3Q7Z3K6 550 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 VPS36Q86VN1 386 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 CCDC155Q8N6L0 562 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 CAGE1Q8TC20 777 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 DYDC2Q96IM9 177 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 UIMC1Q96RL1 719 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 P2RX7Q99572 595 aaKnown RBP14.71□□□□□ -0.05
LINC00563-201ENST00000566370 HSD17B14Q9BPX1 270 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 TSKSQ9UJT2 592 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 REXO2Q9Y3B8 237 aaKnown RBP14.71□□□□□ -0.05
LINC00563-201ENST00000566370 PCDHA13Q9Y5I0 950 aa14.71□□□□□ -0.05
LINC00563-201ENST00000566370 COL4A5P29400 1685 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 CCDC151A5D8V7 595 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 RASSF10A6NK89 507 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 IPO5O00410 1097 aaKnown RBP14.7□□□□□ -0.06
LINC00563-201ENST00000566370 FANCGO15287 622 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 ANXA13P27216 316 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 MAGEA1P43355 309 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 CBX1P83916 185 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 GHRHRQ02643 423 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 CTTNQ14247 550 aaKnown RBP14.7□□□□□ -0.06
LINC00563-201ENST00000566370 ASIC2Q16515 512 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 NBPF9Q3BBW0 867 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 KIAA1755Q5JYT7 1200 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 C10orf76Q5T2E6 689 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 RINT1Q6NUQ1 792 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 CCDC125Q86Z20 511 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 SLC17A8Q8NDX2 589 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 MKNK1Q9BUB5 465 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 WDR18Q9BV38 432 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 TIPINQ9BVW5 301 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 ACBD3Q9H3P7 528 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 TBC1D22BQ9NU19 505 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 PUF60Q9UHX1 559 aaKnown RBP14.7□□□□□ -0.06
LINC00563-201ENST00000566370 LTBP3Q9NS15 1303 aa14.7□□□□□ -0.06
LINC00563-201ENST00000566370 NR3C1P04150 777 aa14.69□□□□□ -0.06
LINC00563-201ENST00000566370 PSMC2P35998 433 aaKnown RBP14.69□□□□□ -0.06
LINC00563-201ENST00000566370 PSMC6P62333 389 aa14.69□□□□□ -0.06
LINC00563-201ENST00000566370 FAM193AP78312 1265 aa14.69□□□□□ -0.06
LINC00563-201ENST00000566370 KCNH2Q12809 1159 aa14.69□□□□□ -0.06
LINC00563-201ENST00000566370 IFI16Q16666 785 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms