RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 NR2E1Q9Y466 385 aa3.95□□□□□ -1.78
SMG1-212ENST00000566328 A0A087X1B8 175 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 ESYT3A0FGR9 886 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 IL18BPO95998 194 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 ADH4P08319 380 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 COL6A2P12110 1019 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 HHEXQ03014 270 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 HSP90AA2PQ14568 343 aaPredicted RBP3.94□□□□□ -1.78
SMG1-212ENST00000566328 MAMDC4Q6UXC1 1216 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 LBX2Q6XYB7 198 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 Q6ZSN1 163 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 RBM12BQ8IXT5 1001 aaKnown RBP3.94□□□□□ -1.78
SMG1-212ENST00000566328 OR14A2Q96R54 314 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 KCNJ15Q99712 375 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 IKZF4Q9H2S9 585 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 C12orf65Q9H3J6 166 aaKnown RBP3.94□□□□□ -1.78
SMG1-212ENST00000566328 ACBD3Q9H3P7 528 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 PRKAG3Q9UGI9 489 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 FBXO10Q9UK96 956 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 PTPN22Q9Y2R2 807 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 MRVI1Q9Y6F6 885 aa3.94□□□□□ -1.78
SMG1-212ENST00000566328 IQCA1LA6NCM1 817 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 B2RBV5 119 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 FAM47E-STBD1D6RA91 191 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 MSCO60682 206 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 LTFP02788 710 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 MAKP20794 623 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 ACRV1P26436 265 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 DNAJA1P31689 397 aaKnown RBP3.93□□□□□ -1.78
SMG1-212ENST00000566328 GRIA2P42262 883 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 ETV4P43268 484 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 TOP3AQ13472 1001 aaPredicted RBP3.93□□□□□ -1.78
SMG1-212ENST00000566328 TUBA3CQ13748 450 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 RNF151Q2KHN1 245 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 SLC10A6Q3KNW5 377 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 IGFL4Q6B9Z1 124 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 TUBA3EQ6PEY2 450 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 CXXC5Q7LFL8 322 aaKnown RBP3.93□□□□□ -1.78
SMG1-212ENST00000566328 NLGN4XQ8N0W4 816 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 NEU4Q8WWR8 484 aaPredicted RBP3.93□□□□□ -1.78
SMG1-212ENST00000566328 ALG1Q9BT22 464 aa3.93□□□□□ -1.78
SMG1-212ENST00000566328 PPARGC1AQ9UBK2 798 aaKnown RBP3.93□□□□□ -1.78
SMG1-212ENST00000566328 PUF60Q9UHX1 559 aaKnown RBP3.93□□□□□ -1.78
SMG1-212ENST00000566328 A0A1W2PQU0 124 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 PLSCR1O15162 318 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 NKRFO15226 690 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMG1-212ENST00000566328 DLX3O60479 287 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 SOD2P04179 222 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 HIBADHP31937 336 aaKnown RBP3.92□□□□□ -1.78
SMG1-212ENST00000566328 RRADP55042 308 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 DGCR2P98153 550 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 DBPQ10586 325 aaPredicted RBP3.92□□□□□ -1.78
SMG1-212ENST00000566328 NFYCQ13952 458 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 WDR72Q3MJ13 1102 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 HABP4Q5JVS0 413 aaKnown RBP3.92□□□□□ -1.78
SMG1-212ENST00000566328 MRM1Q6IN84 353 aaKnown RBP3.92□□□□□ -1.78
SMG1-212ENST00000566328 EP400NLQ6ZTU2 488 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 IFNL3Q8IZI9 196 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMG1-212ENST00000566328 CACTINQ8WUQ7 758 aaKnown RBP3.92□□□□□ -1.78
SMG1-212ENST00000566328 SGSM3Q96HU1 749 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 DPYSL5Q9BPU6 564 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 PLA2G12BQ9BX93 195 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 NELFAQ9H3P2 528 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 ARHGAP28Q9P2N2 729 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 R3HCC1Q9Y3T6 440 aaKnown RBP3.92□□□□□ -1.78
SMG1-212ENST00000566328 TELO2Q9Y4R8 837 aa3.92□□□□□ -1.78
SMG1-212ENST00000566328 ZBTB7CA1YPR0 619 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 U2SURPO15042 1029 aaKnown RBP3.91□□□□□ -1.78
SMG1-212ENST00000566328 CYP27B1O15528 508 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 ARHGAP6O43182 974 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 GJB6O95452 261 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 HMGCRP04035 888 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 C1SP09871 688 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 NANOS3P60323 173 aaKnown RBP3.91□□□□□ -1.78
SMG1-212ENST00000566328 GPR85P60893 370 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 GNL2Q13823 731 aaKnown RBP3.91□□□□□ -1.78
SMG1-212ENST00000566328 DNAJC10Q8IXB1 793 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 IL17DQ8TAD2 202 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 WDR48Q8TAF3 677 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 ZNF483Q8TF39 744 aaPredicted RBP3.91□□□□□ -1.78
SMG1-212ENST00000566328 ZG16BQ96DA0 208 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 ZDHHC5Q9C0B5 715 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 ZNF703Q9H7S9 590 aaPredicted RBP3.91□□□□□ -1.78
SMG1-212ENST00000566328 SLC39A2Q9NP94 309 aa3.91□□□□□ -1.78
SMG1-212ENST00000566328 ACOT7O00154 380 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 FGFR1P11362 822 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 TGM1P22735 817 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 GJA4P35212 333 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 MFAP1P55081 439 aaKnown RBP3.9□□□□□ -1.79
SMG1-212ENST00000566328 BTBD8Q5XKL5 378 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 STYK1Q6J9G0 422 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 USP30Q70CQ3 517 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 MRGPRGQ86SM5 289 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 ADGRE4PQ86SQ3 457 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 THEMISQ8N1K5 641 aaPredicted RBP3.9□□□□□ -1.79
SMG1-212ENST00000566328 MRRFQ96E11 262 aaKnown RBP3.9□□□□□ -1.79
SMG1-212ENST00000566328 CRAMP1Q96RY5 1269 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 PRRX2Q99811 253 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 AARSD1Q9BTE6 412 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms