RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CEP152O94986 1710 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 KRT86O43790 486 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CEP104O60308 925 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 SRGNP10124 158 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 YY1P25490 414 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PPP4R4Q6NUP7 873 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 NFRKBQ6P4R8 1299 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 SLC17A8Q8NDX2 589 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 LPIN2Q92539 896 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PRCCQ92733 491 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 SUCLG2Q96I99 432 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PLVAPQ9BX97 442 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 FAM217BQ9NTX9 383 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 PDP2Q9P2J9 529 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZNHIT2Q9UHR6 403 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 SALL4Q9UJQ4 1053 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 KLF18A0A0U1RQI7 1052 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ESYT3A0FGR9 886 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 IPO5O00410 1097 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 CAPN9O14815 690 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 USO1O60763 962 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 TSC22D2O75157 780 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 TMOD1P28289 359 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CYLC1P35663 651 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 MMP13P45452 471 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 BPIFB4P59827 614 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PLOD1Q02809 727 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 CLPPQ16740 277 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 UBE2Q1Q7Z7E8 422 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 SPIRE2Q8WWL2 714 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 AZI2Q9H6S1 392 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 BZW2Q9Y6E2 419 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 F8W8V4 182 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 UPP2O95045 317 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CHGBP05060 677 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ACADSP16219 412 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 GUCY2FP51841 1108 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CACNA2D1P54289 1103 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PHEXP78562 749 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PPP2R5BQ15173 497 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 RNF220Q5VTB9 566 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 RAB34Q9BZG1 259 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 TTLL3Q9Y4R7 772 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 XDHP47989 1333 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 GCOM1H8Y6P7 765 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 TRAFD1O14545 582 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 MYZAPP0CAP1 466 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PIM1P11309 404 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 VARSP26640 1264 aaKnown RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 TMEM62Q0P6H9 643 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 IDI1Q13907 227 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CGB2Q6NT52 195 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD9-218ENST00000566029 PTPRN2Q92932 1015 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 OXCT2Q9BYC2 517 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 RNF14Q9UBS8 474 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PRKAG3Q9UGI9 489 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CAPN11Q9UMQ6 739 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZFYVE16Q7Z3T8 1539 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PTPRUQ92729 1446 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 WDR19Q8NEZ3 1342 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 PALM3A6NDB9 673 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 TJP3O95049 919 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 ZNF24P17028 368 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CD97P48960 835 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 CCSAPQ6IQ19 270 aaPredicted RBP3.16□□□□□ -1.9
CHD9-218ENST00000566029 EHMT1Q9H9B1 1298 aa3.16□□□□□ -1.9
CHD9-218ENST00000566029 KIF1AQ12756 1690 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 WDR91A4D1P6 747 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 MED1Q15648 1581 aaPredicted RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 IFT20Q8IY31 132 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 KBTBD2Q8IY47 623 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 DSCC1Q9BVC3 393 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 CCDC8Q9H0W5 538 aaPredicted RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 ADAM7Q9H2U9 754 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 COPRSQ9NQ92 184 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 PICK1Q9NRD5 415 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 TUBGCP4Q9UGJ1 667 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 LUC7L2Q9Y383 392 aaKnown RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 AGTP01019 485 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 RASA1P20936 1047 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 MRPS25P82663 173 aaKnown RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 PTPROQ16827 1216 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 NCCRP1Q6ZVX7 275 aaPredicted RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 FLAD1Q8NFF5 587 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 ARHGAP23Q9P227 1491 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 PDS5AQ29RF7 1337 aaKnown RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 LYNP07948 512 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 BCRP11274 1271 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 USP49Q70CQ1 688 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 TMTC2Q8N394 836 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 GATA6Q92908 595 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 EDC3Q96F86 508 aaKnown RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 CDK19Q9BWU1 502 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 FAM192AQ9GZU8 254 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 KIAA1522Q9P206 1035 aaPredicted RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 ZNF652Q9Y2D9 606 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 SRPRBQ9Y5M8 271 aaKnown RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 QRICH2Q9H0J4 1663 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms