RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 MMP3P08254 477 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 MYL3P08590 195 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 CCL5P13501 91 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 TCF7P36402 384 aaPredicted RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 SYKP43405 635 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 SLC26A2P50443 739 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 CYP4A11Q02928 519 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 CTTNQ14247 550 aaKnown RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 KARSQ15046 597 aaKnown RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 GNASQ5JWF2 1037 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 OTUD6AQ7L8S5 288 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 PLPPR4Q7Z2D5 763 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 CATSPER3Q86XQ3 398 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 CKAP2LQ8IYA6 745 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 IQUBQ8NA54 791 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 PCSK9Q8NBP7 692 aaKnown RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 LENG1Q96BZ8 264 aaPredicted RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 ARMC5Q96C12 935 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 CCDC43Q96MW1 224 aaKnown RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 NACC1Q96RE7 527 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 HSD17B14Q9BPX1 270 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 LXNQ9BS40 222 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 KATNAL1Q9BW62 490 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 PANK2Q9BZ23 570 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 UNC93B1Q9H1C4 597 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 NRBP2Q9NSY0 501 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 RGL1Q9NZL6 768 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 USP25Q9UHP3 1055 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 ZNF215Q9UL58 517 aaPredicted RBP8.72□□□□□ -1.01
CDH1-208ENST00000565810 KCNH3Q9ULD8 1083 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 KIAA1024Q9UPX6 916 aa8.72□□□□□ -1.01
CDH1-208ENST00000565810 IGKV6D-21A0A0A0MT36 114 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 FAM237AA0A1B0GTK4 181 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 POTEB3A0JP26 581 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 ADCY6O43306 1168 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 MED24O75448 989 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 LGR5O75473 907 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 PGK1P00558 417 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 XRCC6P12956 609 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDH1-208ENST00000565810 PFKFB1P16118 471 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 CAPN2P17655 700 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 STAT6P42226 847 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 MTFR1Q15390 333 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 HYIQ5T013 277 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 POTEBQ6S5H4 581 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 USP49Q70CQ1 688 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 C4orf19Q8IY42 314 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 CEP57L1Q8IYX8 460 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 PDILTQ8N807 584 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 AFAP1L1Q8TED9 768 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 ZNF333Q96JL9 665 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 FAM167AQ96KS9 214 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 DEFB118Q96PH6 123 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 PLIN2Q99541 437 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 MMTAG2Q9BU76 263 aaKnown RBP8.71□□□□□ -1.02
CDH1-208ENST00000565810 TMEM106CQ9BVX2 250 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 MCOLN1Q9GZU1 580 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 UPF3AQ9H1J1 476 aaKnown RBP8.71□□□□□ -1.02
CDH1-208ENST00000565810 CUEDC2Q9H467 287 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 DDX19AQ9NUU7 478 aaKnown RBP8.71□□□□□ -1.02
CDH1-208ENST00000565810 ERAP1Q9NZ08 941 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 HOOK1Q9UJC3 728 aaKnown RBP8.71□□□□□ -1.02
CDH1-208ENST00000565810 MAFBQ9Y5Q3 323 aaPredicted RBP8.71□□□□□ -1.02
CDH1-208ENST00000565810 SYNRGQ9UMZ2 1314 aa8.71□□□□□ -1.02
CDH1-208ENST00000565810 RBBP6Q7Z6E9 1792 aaKnown RBP8.71□□□□□ -1.02
CDH1-208ENST00000565810 KBTBD13C9JR72 458 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 H3BRB1 525 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 KINO60870 393 aaKnown RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 ADAMTS4O75173 837 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 CABYRO75952 493 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 ZNF202O95125 648 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 LYPLA2O95372 231 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 TFRCP02786 760 aaKnown RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 LGALS2P05162 132 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 SPATA31C1P0DKV0 1188 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 HOXD8P13378 290 aaPredicted RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 PLCG1P19174 1290 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 PTGS1P23219 599 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 CST5P28325 142 aaPredicted RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 YWHABP31946 246 aaKnown RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 NDUFA8P51970 172 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 NKX3-2P78367 333 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 BEX3Q00994 111 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 AMPD3Q01432 767 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 FAM160A1Q05DH4 1040 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 NFKBIBQ15653 356 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 SKOR2Q2VWA4 1001 aaPredicted RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 TMEM119Q4V9L6 283 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 XKR3Q5GH77 459 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 LHX8Q68G74 356 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 TRMT1LQ7Z2T5 733 aaKnown RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 CCDC60Q8IWA6 550 aaPredicted RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 CNNM3Q8NE01 707 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 KLHDC9Q8NEP7 349 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 BBXQ8WY36 941 aaPredicted RBP8.7□□□□□ -1.02
CDH1-208ENST00000565810 VTI1AQ96AJ9 217 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 DHX58Q96C10 678 aa8.7□□□□□ -1.02
CDH1-208ENST00000565810 PNMA5Q96PV4 448 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms