RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 SPATA33Q96N06 139 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 MAF1Q9H063 256 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 PLSCR2Q9NRY7 297 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 DLL3Q9NYJ7 618 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
CAPN3-215ENST00000565559 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
CAPN3-215ENST00000565559 DNAH14Q0VDD8 3507 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 TK2O00142 265 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 PER2O15055 1255 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 TREHO43280 583 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 GPAA1O43292 621 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 HMMRO75330 724 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
CAPN3-215ENST00000565559 DGKIO75912 1065 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 SMIM10L2AP0DMW4 78 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 SMIM10L2BP0DMW5 78 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 HOXD8P13378 290 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-215ENST00000565559 AAMPQ13685 434 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 IFNL3Q8IZI9 196 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 FLCNQ8NFG4 579 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 ATP8B4Q8TF62 1192 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 APPBP2Q92624 585 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-215ENST00000565559 BAHCC1Q9P281 2608 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 ZFHX4Q86UP3 3567 aa13.01□□□□□ -0.33
CAPN3-215ENST00000565559 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
CAPN3-215ENST00000565559 H3BRB1 525 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 TECP42680 631 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 PPARAQ07869 468 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 USH1GQ495M9 461 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 ARHGEF16Q5VV41 709 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 KCNV1Q6PIU1 500 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 CCDC105Q8IYK2 499 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 OSBP2Q969R2 916 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 RMDN3Q96TC7 470 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 OSBPL7Q9BZF2 842 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 NAPBQ9H115 298 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
CAPN3-215ENST00000565559 NPDC1Q9NQX5 325 aaPredicted RBP13□□□□□ -0.33
CAPN3-215ENST00000565559 IL17RBQ9NRM6 502 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 DMXL1Q9Y485 3027 aa13□□□□□ -0.33
CAPN3-215ENST00000565559 ENPP3O14638 875 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 NMT2O60551 498 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 PPFIA3O75145 1194 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 GHRP10912 638 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 HOXB8P17481 243 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-215ENST00000565559 AOC1P19801 751 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 HOXC8P31273 242 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 UBE3AQ05086 875 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 DUSP6Q16828 381 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 ANKRD54Q6NXT1 300 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 CYP2W1Q8TAV3 490 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 NECTIN4Q96NY8 510 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 TAAR1Q96RJ0 339 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 RTP3Q9BQQ7 232 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 CHD6Q8TD26 2715 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 CEP250Q9BV73 2442 aa12.99□□□□□ -0.33
CAPN3-215ENST00000565559 CCDC171Q6TFL3 1326 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 RNF113AO15541 343 aaKnown RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 RAB11FIP3O75154 756 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 EIF2AK2P19525 551 aaKnown RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 SDHBP21912 280 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 RBM10P98175 930 aaKnown RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 HSDL1Q3SXM5 330 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 CELF3Q5SZQ8 465 aaKnown RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 PDE12Q6L8Q7 609 aaKnown RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 CES5AQ6NT32 575 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 ZC3H14Q6PJT7 736 aaKnown RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 TMEM184AQ6ZMB5 413 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 DTWD2Q8NBA8 298 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 VN1R2Q8NFZ6 395 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 SYTL5Q8TDW5 730 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-215ENST00000565559 RUBCNQ92622 972 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 APOL5Q9BWW9 433 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 S1PR5Q9H228 398 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 MLXIPQ9HAP2 919 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 AAASQ9NRG9 546 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 PCDHB12Q9Y5F1 795 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 ATRXP46100 2492 aa12.98□□□□□ -0.33
CAPN3-215ENST00000565559 ABCB11O95342 1321 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 C2CD4DB7Z1M9 353 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 HRO43593 1189 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 SORBS3O60504 671 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 GGPS1O95749 300 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 STAG3L1P0CL83 205 aa12.97□□□□□ -0.33
CAPN3-215ENST00000565559 TOP1P11387 765 aaKnown RBP12.97□□□□□ -0.33
CAPN3-215ENST00000565559 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-215ENST00000565559 PAN2Q504Q3 1202 aaKnown RBP12.97□□□□□ -0.33
CAPN3-215ENST00000565559 CWF19L1Q69YN2 538 aaKnown RBP12.97□□□□□ -0.33
CAPN3-215ENST00000565559 RSPH3Q86UC2 560 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms