RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 ACRP10323 421 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 CKBP12277 381 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 GCFC2P16383 781 aaKnown RBP17.47■□□□□ 0.39
COMMD4-212ENST00000565517 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 KRT40Q6A162 431 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 MIS18BP1Q6P0N0 1132 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 ZNF365Q70YC5 407 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 VWCEQ96DN2 955 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 RNPC3Q96LT9 517 aaKnown RBP17.47■□□□□ 0.39
COMMD4-212ENST00000565517 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
COMMD4-212ENST00000565517 LAMA3Q16787 3333 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 RRN3P2A6NIE6 340 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 TREHO43280 583 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 CAND2O75155 1236 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 TDP2O95551 362 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 MARK3P27448 753 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 LETM2Q2VYF4 491 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 FAM160B1Q5W0V3 765 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 LRRC8DQ7L1W4 858 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 LMBR1Q8WVP7 490 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 HERVK_113Q902F9 699 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 DDX25Q9UHL0 483 aaKnown RBP17.46■□□□□ 0.39
COMMD4-212ENST00000565517 PCDHA10Q9Y5I2 948 aa17.46■□□□□ 0.39
COMMD4-212ENST00000565517 MBLAC1A4D2B0 266 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-212ENST00000565517 BTBD18B2RXH4 712 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 GAS7O60861 476 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 PSMD10O75832 226 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 PSAPP07602 524 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 PPFIA1Q13136 1202 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 NR5A1Q13285 461 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 PLCB4Q15147 1175 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 GRIK4Q16099 956 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 LRCH2Q5VUJ6 765 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 DIS3L2Q8IYB7 885 aaKnown RBP17.45■□□□□ 0.38
COMMD4-212ENST00000565517 ETNPPLQ8TBG4 499 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 WNT8BQ93098 351 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 C8orf76Q96K31 380 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 UIMC1Q96RL1 719 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 TEKT3Q9BXF9 490 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 MTIF3Q9H2K0 278 aaKnown RBP17.45■□□□□ 0.38
COMMD4-212ENST00000565517 ZNF302Q9NR11 478 aa17.45■□□□□ 0.38
COMMD4-212ENST00000565517 WDR64B1ANS9 1081 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 BACH1O14867 736 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 TBX3O15119 743 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 INSRRP14616 1297 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 SFNP31947 248 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 SMAD3P84022 425 aaKnown RBP17.44■□□□□ 0.38
COMMD4-212ENST00000565517 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
COMMD4-212ENST00000565517 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
COMMD4-212ENST00000565517 ZNF618Q5T7W0 954 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 SWSAP1Q6NVH7 229 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 TAF2Q6P1X5 1199 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 TRAF7Q6Q0C0 670 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 CCDC60Q8IWA6 550 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-212ENST00000565517 FAM184AQ8NB25 1140 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 RDM1Q8NG50 284 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 LRCH3Q96II8 777 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 TMX3Q96JJ7 454 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 FAM20AQ96MK3 541 aa17.44■□□□□ 0.38
COMMD4-212ENST00000565517 MAFBQ9Y5Q3 323 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-212ENST00000565517 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-212ENST00000565517 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-212ENST00000565517 POTEB3A0JP26 581 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 HBP1O60381 514 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 CCNT1O60563 726 aaKnown RBP17.43■□□□□ 0.38
COMMD4-212ENST00000565517 CD2BP2O95400 341 aaKnown RBP17.43■□□□□ 0.38
COMMD4-212ENST00000565517 CXCL10P02778 98 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 RPLP2P05387 115 aaKnown RBP17.43■□□□□ 0.38
COMMD4-212ENST00000565517 ACTN1P12814 892 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 THPOP40225 353 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 JAK3P52333 1124 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 GPNMBQ14956 572 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 MARCH8Q5T0T0 291 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 POTEBQ6S5H4 581 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 B3GNT9Q6UX72 402 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 DEFB128Q7Z7B8 93 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 ATP8B4Q8TF62 1192 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 KCNMB3Q9NPA1 279 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 DISC1Q9NRI5 854 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 TUBE1Q9UJT0 475 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 TRPC6Q9Y210 931 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 SAMM50Q9Y512 469 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 EVPLQ92817 2033 aa17.43■□□□□ 0.38
COMMD4-212ENST00000565517 LAMA2P24043 3122 aaKnown RBP17.42■□□□□ 0.38
COMMD4-212ENST00000565517 RSPH10B2B2RC85 870 aa17.42■□□□□ 0.38
COMMD4-212ENST00000565517 SLC37A4O43826 429 aa17.42■□□□□ 0.38
COMMD4-212ENST00000565517 RSPH10BP0C881 870 aa17.42■□□□□ 0.38
COMMD4-212ENST00000565517 OTOP2Q7RTS6 562 aa17.42■□□□□ 0.38
COMMD4-212ENST00000565517 FOXP1Q9H334 677 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-212ENST00000565517 UNC45AQ9H3U1 944 aa17.42■□□□□ 0.38
COMMD4-212ENST00000565517 KIF3AQ9Y496 699 aa17.42■□□□□ 0.38
COMMD4-212ENST00000565517 COL1A2P08123 1366 aa17.41■□□□□ 0.38
COMMD4-212ENST00000565517 FAM205CA6NFA0 338 aa17.41■□□□□ 0.38
COMMD4-212ENST00000565517 NBNO60934 754 aa17.41■□□□□ 0.38
COMMD4-212ENST00000565517 ATP4AP20648 1035 aa17.41■□□□□ 0.38
COMMD4-212ENST00000565517 FOSBP53539 338 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms