RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 MBLAC1A4D2B0 266 aaPredicted RBP16.8■□□□□ 0.28
USB1-210ENST00000565151 hCG_1984214I3L0E3 225 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 MAFGO15525 162 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 TLL1O43897 1013 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 ATG7O95352 703 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 GJB5O95377 273 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 FOSP01100 380 aaPredicted RBP16.8■□□□□ 0.28
USB1-210ENST00000565151 ACTR2P61160 394 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 FGD1P98174 961 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 FAM117BQ6P1L5 589 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 ZNF713Q8N859 430 aaPredicted RBP16.8■□□□□ 0.28
USB1-210ENST00000565151 TRAPPC12Q8WVT3 735 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
USB1-210ENST00000565151 JPH1Q9HDC5 661 aaPredicted RBP16.8■□□□□ 0.28
USB1-210ENST00000565151 SLC9A2Q9UBY0 812 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 ZNF215Q9UL58 517 aaPredicted RBP16.8■□□□□ 0.28
USB1-210ENST00000565151 RALGAPA2Q2PPJ7 1873 aa16.8■□□□□ 0.28
USB1-210ENST00000565151 NRCAMQ92823 1304 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 IFNAR1P17181 557 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 KCNJ6P48051 423 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 AP3B2Q13367 1082 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 IKBKEQ14164 716 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 GRIK4Q16099 956 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 ARNTL2Q8WYA1 636 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 ERAP1Q9NZ08 941 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 MTCH2Q9Y6C9 303 aa16.79■□□□□ 0.28
USB1-210ENST00000565151 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 CYP3A4P08684 503 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 INSRRP14616 1297 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 POU3F3P20264 500 aaPredicted RBP16.78■□□□□ 0.28
USB1-210ENST00000565151 ATP4AP20648 1035 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 PPFIA1Q13136 1202 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 PLCB4Q15147 1175 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 NIPA1Q7RTP0 329 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 RPAINQ86UA6 219 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 TEX2Q8IWB9 1127 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 DNAJB3Q8WWF6 145 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 GLG1Q92896 1179 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 LENG9Q96B70 501 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 SLC26A6Q9BXS9 759 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 SMARCAD1Q9H4L7 1026 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 EHMT1Q9H9B1 1298 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 VPS54Q9P1Q0 977 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 MYO7AQ13402 2215 aa16.78■□□□□ 0.28
USB1-210ENST00000565151 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 LINC01553A4QN01 128 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 DDX39AO00148 427 aaKnown RBP16.77■□□□□ 0.28
USB1-210ENST00000565151 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
USB1-210ENST00000565151 CAND2O75155 1236 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 GNAT1P11488 350 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 IGBP1P78318 339 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 GRB10Q13322 594 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 NPY5RQ15761 445 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 ABHD15Q6UXT9 468 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 AIFM3Q96NN9 605 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 RNF26Q9BY78 433 aaPredicted RBP16.77■□□□□ 0.28
USB1-210ENST00000565151 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
USB1-210ENST00000565151 PSMA5P28066 241 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 HTRA4P83105 476 aaPredicted RBP16.76■□□□□ 0.27
USB1-210ENST00000565151 LPIN1Q14693 890 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 PLA2G4DQ86XP0 818 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
USB1-210ENST00000565151 RAD9AQ99638 391 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 AGO3Q9H9G7 860 aaKnown RBP16.76■□□□□ 0.27
USB1-210ENST00000565151 SUGCTQ9HAC7 445 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 TUBE1Q9UJT0 475 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 TTC28Q96AY4 2481 aa16.76■□□□□ 0.27
USB1-210ENST00000565151 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 KIF28PB7ZC32 967 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 GHRP10912 638 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 STAT5BP51692 787 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 ERVK-21P61565 698 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 PLPPR4Q7Z2D5 763 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 REXO1Q8N1G1 1221 aaKnown RBP16.75■□□□□ 0.27
USB1-210ENST00000565151 SP7Q8TDD2 431 aaPredicted RBP16.75■□□□□ 0.27
USB1-210ENST00000565151 GDPD5Q8WTR4 605 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 LINC01599Q8WXQ3 324 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 SEPT8Q92599 483 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 TOP1MTQ969P6 601 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 SDF4Q9BRK5 362 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 C17orf80Q9BSJ5 609 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 ZBED2Q9BTP6 218 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 GLT8D2Q9H1C3 349 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 CDY2AQ9Y6F7 541 aa16.75■□□□□ 0.27
USB1-210ENST00000565151 FNDC1Q4ZHG4 1894 aaPredicted RBP16.75■□□□□ 0.27
USB1-210ENST00000565151 M0R2N6 131 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 IPO5O00410 1097 aaKnown RBP16.74■□□□□ 0.27
USB1-210ENST00000565151 EFCAB14O75071 495 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 CIITAP33076 1130 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 ZNF76P36508 570 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 STK3Q13188 491 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 FBXO47Q5MNV8 452 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 RTN4RL1Q86UN2 441 aaPredicted RBP16.74■□□□□ 0.27
USB1-210ENST00000565151 MICALL1Q8N3F8 863 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 GJA10Q969M2 543 aa16.74■□□□□ 0.27
USB1-210ENST00000565151 ZNF274Q96GC6 653 aaPredicted RBP16.74■□□□□ 0.27
USB1-210ENST00000565151 IFIH1Q9BYX4 1025 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms