RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ZNF467Q7Z7K2 595 aaPredicted RBP24.48■■□□□ 1.51
LINC01960-201ENST00000563759 AOPEPQ8N6M6 819 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 NACC1Q96RE7 527 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 ZSWIM4Q9H7M6 989 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 SLC5A4Q9NY91 659 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 WRAP73Q9P2S5 460 aaPredicted RBP24.48■■□□□ 1.51
LINC01960-201ENST00000563759 PCDHA10Q9Y5I2 948 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 AOC2O75106 756 aa24.47■■□□□ 1.51
LINC01960-201ENST00000563759 KRT18P05783 430 aaKnown RBP24.47■■□□□ 1.51
LINC01960-201ENST00000563759 ZNF658Q5TYW1 1059 aaPredicted RBP24.47■■□□□ 1.51
LINC01960-201ENST00000563759 KCNV1Q6PIU1 500 aa24.47■■□□□ 1.51
LINC01960-201ENST00000563759 ANP32BQ92688 251 aaKnown RBP24.47■■□□□ 1.51
LINC01960-201ENST00000563759 BCAS3Q9H6U6 928 aa24.47■■□□□ 1.51
LINC01960-201ENST00000563759 RHOBTB3O94955 611 aa24.47■■□□□ 1.51
LINC01960-201ENST00000563759 IDEP14735 1019 aa24.47■■□□□ 1.51
LINC01960-201ENST00000563759 NEDD9Q14511 834 aa24.47■■□□□ 1.51
LINC01960-201ENST00000563759 IQCB1Q15051 598 aa24.47■■□□□ 1.51
LINC01960-201ENST00000563759 SMYD4Q8IYR2 804 aaPredicted RBP24.47■■□□□ 1.51
LINC01960-201ENST00000563759 SYT2Q8N9I0 419 aaPredicted RBP24.47■■□□□ 1.51
LINC01960-201ENST00000563759 CYP11B2P19099 503 aa24.46■■□□□ 1.51
LINC01960-201ENST00000563759 ACTR2P61160 394 aa24.46■■□□□ 1.51
LINC01960-201ENST00000563759 CNNM4Q6P4Q7 775 aa24.46■■□□□ 1.51
LINC01960-201ENST00000563759 UNC13DQ70J99 1090 aa24.46■■□□□ 1.51
LINC01960-201ENST00000563759 DIS3Q9Y2L1 958 aaKnown RBP24.46■■□□□ 1.51
LINC01960-201ENST00000563759 PSAPP07602 524 aa24.45■■□□□ 1.51
LINC01960-201ENST00000563759 PSMC5P62195 406 aa24.45■■□□□ 1.51
LINC01960-201ENST00000563759 DHX40Q8IX18 779 aaKnown RBP24.45■■□□□ 1.51
LINC01960-201ENST00000563759 MAML3Q96JK9 1138 aa24.45■■□□□ 1.51
LINC01960-201ENST00000563759 ZSWIM8A7E2V4 1837 aa24.45■■□□□ 1.5
LINC01960-201ENST00000563759 PVALEFA0A1B0GWK0 134 aa24.45■■□□□ 1.5
LINC01960-201ENST00000563759 UGCGQ16739 394 aa24.45■■□□□ 1.5
LINC01960-201ENST00000563759 GDAQ9Y2T3 454 aa24.45■■□□□ 1.5
LINC01960-201ENST00000563759 FARP2O94887 1054 aaPredicted RBP24.44■■□□□ 1.5
LINC01960-201ENST00000563759 GGPS1O95749 300 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 RAD51AP2Q09MP3 1159 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 MAP2K5Q13163 448 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 LY6KQ17RY6 165 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 MIS18BP1Q6P0N0 1132 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 REM2Q8IYK8 340 aaPredicted RBP24.44■■□□□ 1.5
LINC01960-201ENST00000563759 ATP6V0A1Q93050 837 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 DNAJC19Q96DA6 116 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 CCDC43Q96MW1 224 aaKnown RBP24.44■■□□□ 1.5
LINC01960-201ENST00000563759 VTA1Q9NP79 307 aa24.44■■□□□ 1.5
LINC01960-201ENST00000563759 TNPO2O14787 897 aaKnown RBP24.43■■□□□ 1.5
LINC01960-201ENST00000563759 ZBTB39O15060 712 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 TTLL4Q14679 1199 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 MORN1Q5T089 497 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 KLHL10Q6JEL2 608 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 SCFD2Q8WU76 684 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 MLXIPQ9HAP2 919 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.43■■□□□ 1.5
LINC01960-201ENST00000563759 DDX41Q9UJV9 622 aaKnown RBP24.43■■□□□ 1.5
LINC01960-201ENST00000563759 SMTNL1A8MU46 457 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 LYPLA2O95372 231 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 ARIH2O95376 493 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 PLCB2Q00722 1185 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 MYL5Q02045 173 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 CACNB1Q02641 598 aaPredicted RBP24.43■■□□□ 1.5
LINC01960-201ENST00000563759 METTL7BQ6UX53 244 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 MAMDC4Q6UXC1 1216 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 CCDC65Q8IXS2 484 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 C4orf19Q8IY42 314 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 GTPBP4Q9BZE4 634 aaKnown RBP24.43■■□□□ 1.5
LINC01960-201ENST00000563759 GABBR1Q9UBS5 961 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 TELO2Q9Y4R8 837 aa24.43■■□□□ 1.5
LINC01960-201ENST00000563759 NPHP3-ACAD11A0A0J9YXS1 232 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 ARHGEF35A5YM69 484 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 BACH1O14867 736 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 DKC1O60832 514 aaKnown RBP eCLIP24.42■■□□□ 1.5
LINC01960-201ENST00000563759 SUPT20HL2P0C7V6 817 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 ARSHQ5FYA8 562 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 NPLOC4Q8TAT6 608 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 RUSC1Q9BVN2 902 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 PANK4Q9NVE7 773 aa24.42■■□□□ 1.5
LINC01960-201ENST00000563759 IKBKBO14920 756 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 TXNP10599 105 aaKnown RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 CD44P16070 742 aaKnown RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 YWHABP31946 246 aaKnown RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 TPM4P67936 248 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 STIM1Q13586 685 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 CT47A1Q5JQC4 288 aaPredicted RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 SWSAP1Q6NVH7 229 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 ABHD15Q6UXT9 468 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 CCDC60Q8IWA6 550 aaPredicted RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 SOCS4Q8WXH5 440 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 REEP2Q9BRK0 252 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 TINF2Q9BSI4 451 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 SYNGAP1Q96PV0 1343 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 SYNRGQ9UMZ2 1314 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 ERCC5P28715 1186 aaPredicted RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 COASYQ13057 564 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 RINT1Q6NUQ1 792 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 TRMT1LQ7Z2T5 733 aaKnown RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 ZHX3Q9H4I2 956 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 PDGFCQ9NRA1 345 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 DBR1Q9UK59 544 aaKnown RBP24.41■■□□□ 1.5
LINC01960-201ENST00000563759 CTNND2Q9UQB3 1225 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 MAPK8IP1Q9UQF2 711 aa24.41■■□□□ 1.5
LINC01960-201ENST00000563759 PPP1R3GB7ZBB8 358 aa24.4■■□□□ 1.5
LINC01960-201ENST00000563759 TBCAO75347 108 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms