RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CYP2W1Q8TAV3 490 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 LINC01599Q8WXQ3 324 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 GLG1Q92896 1179 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 SMARCAD1Q9H4L7 1026 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 AGO3Q9H9G7 860 aaKnown RBP19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 CDY2AQ9Y6F7 541 aa19.26■□□□□ 0.67
HDGFL3-203ENST00000563404 ATG2AQ2TAZ0 1938 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 RALGAPA2Q2PPJ7 1873 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 SPDYE3A6NKU9 549 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 C5orf67F2Z3F1 127 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 GPR37L1O60883 481 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 CTNNB1P35222 781 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 IGBP1P78318 339 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 SGMS1Q86VZ5 419 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 MICU3Q86XE3 530 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 GJD3Q8N144 294 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 ZNF689Q96CS4 500 aaPredicted RBP19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 NSUN3Q9H649 340 aaKnown RBP19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 ADGRA3Q8IWK6 1321 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 CNTNAP5Q8WYK1 1306 aa19.25■□□□□ 0.67
HDGFL3-203ENST00000563404 GRM6O15303 877 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 MAFGO15525 162 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 INSRRP14616 1297 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 BMPR1AP36894 532 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 RSPH3Q86UC2 560 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 PABPC5Q96DU9 382 aaKnown RBP19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 FAM122AQ96E09 287 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 PGBD1Q96JS3 809 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 JPH1Q9HDC5 661 aaPredicted RBP19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 ANO2Q9NQ90 1003 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 KCNH7Q9NS40 1196 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 MYO7AQ13402 2215 aa19.24■□□□□ 0.67
HDGFL3-203ENST00000563404 ARP10275 920 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 CD52P31358 61 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 MRPS6P82932 125 aaKnown RBP19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 FUT2Q10981 343 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 TSHZ1Q6ZSZ6 1077 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 RTN4RL1Q86UN2 441 aaPredicted RBP19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 SKAP1Q86WV1 359 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 TRAPPC12Q8WVT3 735 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 CLP1Q92989 425 aaKnown RBP19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 MXRA8Q9BRK3 442 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 FAM49AQ9H0Q0 323 aaPredicted RBP19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 SLC9A2Q9UBY0 812 aa19.23■□□□□ 0.67
HDGFL3-203ENST00000563404 TTC3P53804 2025 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 POTEB3A0JP26 581 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 RB1P06400 928 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 LTBRP36941 435 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 ITGB3BPQ13352 177 aaPredicted RBP19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 PLCB4Q15147 1175 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 APOA5Q6Q788 366 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 POTEBQ6S5H4 581 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 CRIPAKQ8N1N5 446 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 TCEANC2Q96MN5 208 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 RIC8AQ9NPQ8 531 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 BRPF3Q9ULD4 1205 aa19.22■□□□□ 0.67
HDGFL3-203ENST00000563404 RRN3P2A6NIE6 340 aa19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 DGKIO75912 1065 aa19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 ACTR2P61160 394 aa19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 EXOSC10Q01780 885 aaKnown RBP19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 TMEM62Q0P6H9 643 aa19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 PUS10Q3MIT2 529 aaKnown RBP19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 EP400NLQ6ZTU2 488 aa19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 CLDND1Q9NY35 253 aa19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 NFASCO94856 1347 aa19.21■□□□□ 0.67
HDGFL3-203ENST00000563404 STXBP3O00186 592 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 SSTR3P32745 418 aaPredicted RBP19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 NAPAP54920 295 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 DLX2Q07687 328 aaPredicted RBP19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 HYAL1Q12794 435 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 CAMK1Q14012 370 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 BTG3Q14201 252 aaPredicted RBP19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 CTC1Q2NKJ3 1217 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 C11orf84Q9BUA3 381 aaPredicted RBP19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 AZI2Q9H6S1 392 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 AGO4Q9HCK5 861 aaKnown RBP19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 FAM217BQ9NTX9 383 aaPredicted RBP19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 TMEM260Q9NX78 707 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 TRPC6Q9Y210 931 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 PCDHA2Q9Y5H9 948 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 TRPV2Q9Y5S1 764 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 C5orf42Q9H799 3197 aa19.2■□□□□ 0.66
HDGFL3-203ENST00000563404 ATG7O95352 703 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 GTF2F1P35269 517 aaKnown RBP eCLIP19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 CLK2P49760 499 aaKnown RBP19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 ADCK5Q3MIX3 580 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 CEP55Q53EZ4 464 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 PLPPR4Q7Z2D5 763 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 RASEFQ8IZ41 740 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 NEK1Q96PY6 1258 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 ANO3Q9BYT9 981 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 LMAN2LQ9H0V9 348 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 RBM28Q9NW13 759 aaKnown RBP19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 PADI3Q9ULW8 664 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 RWDD3Q9Y3V2 267 aa19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 MRPL42Q9Y6G3 142 aaKnown RBP19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
HDGFL3-203ENST00000563404 MEIS1O00470 390 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 CSPG5O95196 566 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms