RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 OCRLQ01968 901 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 ZNF174Q15697 407 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 MLANAQ16655 118 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 ATP13A4Q4VNC1 1196 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 ESRP1Q6NXG1 681 aaKnown RBP7.79□□□□□ -1.16
LINC00557-201ENST00000563184 ETV3LQ6ZN32 361 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 SPATS2Q86XZ4 545 aaKnown RBP7.79□□□□□ -1.16
LINC00557-201ENST00000563184 DDX56Q9NY93 547 aaKnown RBP7.79□□□□□ -1.16
LINC00557-201ENST00000563184 FAM53CQ9NYF3 392 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 HSPBP1Q9NZL4 362 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 WASF3Q9UPY6 502 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 PRAMEF25A6NGN4 478 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 C8BP07358 591 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 ATF2P15336 505 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 PTX3P26022 381 aaPredicted RBP7.78□□□□□ -1.16
LINC00557-201ENST00000563184 MC3RP41968 323 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 FAM50AQ14320 339 aaKnown RBP7.78□□□□□ -1.16
LINC00557-201ENST00000563184 TMEM132BQ14DG7 1078 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 TEPPQ6URK8 271 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 LDHDQ86WU2 507 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 PROSER1Q86XN7 944 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 COG1Q8WTW3 980 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 CPA5Q8WXQ8 436 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 TOE1Q96GM8 510 aaKnown RBP7.78□□□□□ -1.16
LINC00557-201ENST00000563184 ACSS2Q9NR19 701 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 HOMER2Q9NSB8 354 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 RBPJLQ9UBG7 517 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 PCDHA5Q9Y5H7 936 aa7.78□□□□□ -1.16
LINC00557-201ENST00000563184 LRRC10BA6NIK2 292 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 MMEP08473 750 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 NCKAP1LP55160 1127 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 SMAD3P84022 425 aaKnown RBP7.77□□□□□ -1.17
LINC00557-201ENST00000563184 SMAD2Q15796 467 aaKnown RBP7.77□□□□□ -1.17
LINC00557-201ENST00000563184 NECAB2Q7Z6G3 386 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 SLC5A5Q92911 643 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 SYT3Q9BQG1 590 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 SGPP1Q9BX95 441 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 TRIM8Q9BZR9 551 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 PCIF1Q9H4Z3 704 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 ZMAT4Q9H898 229 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 GCM1Q9NP62 436 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 SIRT5Q9NXA8 310 aa7.77□□□□□ -1.17
LINC00557-201ENST00000563184 TEX51A0A1B0GUA7 166 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 ALG1L2C9J202 215 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 NCAM1P13591 858 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 GUCY2FP51841 1108 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 EPHB3P54753 998 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 CACNB2Q08289 660 aaPredicted RBP7.76□□□□□ -1.17
LINC00557-201ENST00000563184 DBPQ10586 325 aaPredicted RBP7.76□□□□□ -1.17
LINC00557-201ENST00000563184 TERF2Q15554 542 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 CD276Q5ZPR3 534 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 ASB15Q8WXK1 588 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 YIPF4Q9BSR8 244 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 RNF38Q9H0F5 515 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 MS4A5Q9H3V2 200 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 VTA1Q9NP79 307 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 TOMM22Q9NS69 142 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 TYW1Q9NV66 732 aaKnown RBP7.76□□□□□ -1.17
LINC00557-201ENST00000563184 SLC5A4Q9NY91 659 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 BTBD7Q9P203 1132 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 WASHC2CQ9Y4E1 1318 aa7.76□□□□□ -1.17
LINC00557-201ENST00000563184 FOXP2O15409 715 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 PRKD3O94806 890 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 CYP17A1P05093 508 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 IGFBP6P24592 240 aaPredicted RBP7.75□□□□□ -1.17
LINC00557-201ENST00000563184 AOAHP28039 575 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 FNTBP49356 437 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 HERVK_113P62684 666 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 PHC1P78364 1004 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 BRDTQ58F21 947 aaPredicted RBP7.75□□□□□ -1.17
LINC00557-201ENST00000563184 C11orf74Q86VG3 221 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 IGDCC3Q8IVU1 814 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 CLRN3Q8NCR9 226 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 MZB1Q8WU39 189 aa7.75□□□□□ -1.17
LINC00557-201ENST00000563184 FOXRED1Q96CU9 486 aaPredicted RBP7.75□□□□□ -1.17
LINC00557-201ENST00000563184 SEMA7AO75326 666 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 ULK1O75385 1050 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 KATNA1O75449 491 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 MTMR1Q13613 665 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 LRRC32Q14392 662 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 DDB1Q16531 1140 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 GPR158Q5T848 1215 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 BROXQ5VW32 411 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 CD300LDQ6UXZ3 194 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 LIPIQ6XZB0 460 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 RTN4RL1Q86UN2 441 aaPredicted RBP7.74□□□□□ -1.17
LINC00557-201ENST00000563184 PASD1Q8IV76 773 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 FBXO15Q8NCQ5 510 aaPredicted RBP7.74□□□□□ -1.17
LINC00557-201ENST00000563184 SCYL1Q96KG9 808 aa7.74□□□□□ -1.17
LINC00557-201ENST00000563184 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.73□□□□□ -1.17
LINC00557-201ENST00000563184 LCHNA4D1U4 455 aa7.73□□□□□ -1.17
LINC00557-201ENST00000563184 MPIG6BO95866 241 aa7.73□□□□□ -1.17
LINC00557-201ENST00000563184 PDGFRBP09619 1106 aa7.73□□□□□ -1.17
LINC00557-201ENST00000563184 TMEM253P0C7T8 217 aa7.73□□□□□ -1.17
LINC00557-201ENST00000563184 MC4RP32245 332 aa7.73□□□□□ -1.17
LINC00557-201ENST00000563184 NKX3-2P78367 333 aa7.73□□□□□ -1.17
LINC00557-201ENST00000563184 EPHA7Q15375 998 aa7.73□□□□□ -1.17
LINC00557-201ENST00000563184 TARBP2Q15633 366 aaKnown RBP7.73□□□□□ -1.17
LINC00557-201ENST00000563184 HDGFL2Q7Z4V5 671 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms