RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 MBTPS2O43462 519 aa18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 STAG3L1P0CL83 205 aa18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 IRS1P35568 1242 aa18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 MRPS6P82932 125 aaKnown RBP18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 MTMR1Q13613 665 aa18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 HERC4Q5GLZ8 1057 aaPredicted RBP18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 ALYREFQ86V81 257 aaKnown RBP18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 PSTPIP2Q9H939 334 aa18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 CDY2AQ9Y6F7 541 aa18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 KAT6AQ92794 2004 aa18.08■□□□□ 0.48
HERPUD1-205ENST00000562914 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 GSTTP1A0A1W2PQM5 241 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 SPDYE3A6NKU9 549 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 CALM1P0DP23 149 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 CALM2P0DP24 149 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 CALM3P0DP25 149 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 CHMLP26374 656 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 PTH1RQ03431 593 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 MARCH8Q5T0T0 291 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 DNAJB3Q8WWF6 145 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 PIBF1Q8WXW3 757 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 CD207Q9UJ71 328 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 PLAGL2Q9UPG8 496 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 UBIAD1Q9Y5Z9 338 aa18.07■□□□□ 0.48
HERPUD1-205ENST00000562914 DOCK5Q9H7D0 1870 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 ATP9AO75110 1047 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 ITGB5P18084 799 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 ANTXR2P58335 489 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 ADAM15Q13444 863 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 CRIPAKQ8N1N5 446 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 LY9Q9HBG7 655 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 JADE2Q9NQC1 790 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 TELO2Q9Y4R8 837 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 TTC3P53804 2025 aa18.06■□□□□ 0.48
HERPUD1-205ENST00000562914 SGSM2O43147 1006 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 TBX10O75333 385 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 EYA4O95677 639 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 MARK3P27448 753 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 NHLH1Q02575 133 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 DLX2Q07687 328 aaPredicted RBP18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 PKN1Q16512 942 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 NME8Q8N427 588 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 MAP4K1Q92918 833 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 TMEM87BQ96K49 555 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 JPH1Q9HDC5 661 aaPredicted RBP18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 SUPT16HQ9Y5B9 1047 aaKnown RBP18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 TRPV2Q9Y5S1 764 aa18.05■□□□□ 0.48
HERPUD1-205ENST00000562914 KDM3AQ9Y4C1 1321 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 CCDC69A6NI79 296 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 STXBP3O00186 592 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 INSRRP14616 1297 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 CD52P31358 61 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 NDUFV1P49821 464 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 MRE11P49959 708 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 SLC26A2P50443 739 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 PLPPR4Q7Z2D5 763 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 BMP8AQ7Z5Y6 402 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 RNF135Q8IUD6 432 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 EFHBQ8N7U6 833 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 MSLNLQ96KJ4 702 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 IGFLR1Q9H665 355 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 AGO3Q9H9G7 860 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 ALG13Q9NP73 1137 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 SLC9A2Q9UBY0 812 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 PCDHA2Q9Y5H9 948 aa18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 MRPL42Q9Y6G3 142 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-205ENST00000562914 IGSF9BQ9UPX0 1349 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 RBAK-RBAKDNI3L0D1 243 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 MCM5P33992 734 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 LIFRP42702 1097 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 COASYQ13057 564 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 PAK2Q13177 524 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 CAMK1Q14012 370 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 ODR4Q5SWX8 454 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 NFXL1Q6ZNB6 911 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 HFE2Q6ZVN8 426 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 SRBD1Q8N5C6 995 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 EDAQ92838 391 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 PRRX2Q99811 253 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 PCDHA6Q9UN73 950 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 TRPC6Q9Y210 931 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 PCDHA8Q9Y5H6 950 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 TAF6LQ9Y6J9 622 aa18.03■□□□□ 0.48
HERPUD1-205ENST00000562914 NFASCO94856 1347 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 SMIM35A0A1B0GVV1 85 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 PRC1O43663 620 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 ITGB1P05556 798 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 SCG2P13521 617 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 IGBP1P78318 339 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 UBE3AQ05086 875 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms