RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ME3Q16798 604 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 CDONQ4KMG0 1287 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 ZC3H12BQ5HYM0 836 aaKnown RBP10.18□□□□□ -0.78
CDH1-205ENST00000562836 POMZP3Q6PJE2 187 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 LENG1Q96BZ8 264 aaPredicted RBP10.18□□□□□ -0.78
CDH1-205ENST00000562836 ANKRD27Q96NW4 1050 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 LAMP5Q9UJQ1 280 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 PLAAQ9Y263 795 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 GPC6Q9Y625 555 aaPredicted RBP10.18□□□□□ -0.78
CDH1-205ENST00000562836 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 PBRM1Q86U86 1689 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 KIF24Q5T7B8 1368 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 PHLPP2Q6ZVD8 1323 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 SH3TC1Q8TE82 1336 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 ANKRD34BA5PLL1 514 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 TSPY2A6NKD2 308 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 FOXP2O15409 715 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 ATP2C2O75185 946 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 OR5F1O95221 314 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 TSPY3P0CV98 308 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 TSPY8P0CW00 308 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 NCAM1P13591 858 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 CFL1P23528 166 aaKnown RBP10.18□□□□□ -0.78
CDH1-205ENST00000562836 FXR1P51114 621 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH1-205ENST00000562836 ARHGDIBP52566 201 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 TSPY1Q01534 308 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 SPRED3Q2MJR0 410 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 LETM2Q2VYF4 491 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 ODF2Q5BJF6 829 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 TATDN1Q6P1N9 297 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 MIGA2Q7L4E1 593 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 JAZF1Q86VZ6 243 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 TREML1Q86YW5 311 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 SLC44A2Q8IWA5 706 aaPredicted RBP10.18□□□□□ -0.78
CDH1-205ENST00000562836 BBOF1Q8ND07 529 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 NUP85Q9BW27 656 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 NAA15Q9BXJ9 866 aaKnown RBP10.18□□□□□ -0.78
CDH1-205ENST00000562836 FANCEQ9HB96 536 aa10.18□□□□□ -0.78
CDH1-205ENST00000562836 NUP153P49790 1475 aaKnown RBP10.18□□□□□ -0.78
CDH1-205ENST00000562836 BLMP54132 1417 aaPredicted RBP10.17□□□□□ -0.78
CDH1-205ENST00000562836 ANKRD30AQ9BXX3 1397 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 ADAMTS12P58397 1594 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 ST20-MTHFSA0A0A6YYL1 179 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 VWA3AA6NCI4 1184 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 GOLGA8CPA6NN73 597 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 LACTBL1A8MY62 500 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 FAM47E-STBD1D6RA91 191 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 SEMA3EO15041 775 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 EXTL3O43909 919 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 LARGE1O95461 756 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 ENO2P09104 434 aaPredicted RBP10.17□□□□□ -0.78
CDH1-205ENST00000562836 ZKSCAN1P17029 563 aaPredicted RBP10.17□□□□□ -0.78
CDH1-205ENST00000562836 KRT20P35900 424 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 CBX5P45973 191 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 CCR3P51677 355 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 HPCAP84074 193 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 CCDC102BQ68D86 513 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 C3orf62Q6ZUJ4 267 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 ITPRIPQ8IWB1 547 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 STARD8Q92502 1023 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 INTS12Q96CB8 462 aaKnown RBP10.17□□□□□ -0.78
CDH1-205ENST00000562836 FHDC1Q9C0D6 1143 aaPredicted RBP10.17□□□□□ -0.78
CDH1-205ENST00000562836 NTN4Q9HB63 628 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 GMIPQ9P107 970 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 IFRD1O00458 451 aaPredicted RBP10.17□□□□□ -0.78
CDH1-205ENST00000562836 SERPINC1P01008 464 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 FYNP06241 537 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 GNAI3P08754 354 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 CTRB1P17538 263 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 IL32P24001 234 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 SEPHS1P49903 392 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 PLCD1P51178 756 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 MAP3K7CLP57077 242 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 POLR2GP62487 172 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDH1-205ENST00000562836 ZMYM1Q5SVZ6 1142 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 CTRB2Q6GPI1 263 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 KSR1Q8IVT5 923 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 HACE1Q8IYU2 909 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 OR7G1Q8NGA0 311 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 CEP95Q96GE4 821 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 RNF112Q9ULX5 631 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 ATF5Q9Y2D1 282 aaPredicted RBP10.17□□□□□ -0.78
CDH1-205ENST00000562836 PPP2R3BQ9Y5P8 575 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
CDH1-205ENST00000562836 KDM5DQ9BY66 1539 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 TUBB4AP04350 444 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 ASLP04424 464 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 S100A6P06703 90 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 PCK1P35558 622 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 BLVRAP53004 296 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 TPD52P55327 224 aaPredicted RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 GSTO1P78417 241 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 CCDC14Q49A88 953 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 PDCD4Q53EL6 469 aaKnown RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 RASIP1Q5U651 963 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 OR52E8Q6IFG1 317 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 TAS1R3Q7RTX0 852 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 ANKMY2Q8IV38 441 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms