RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 MRIQ9BWK5 157 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 UNC93B1Q9H1C4 597 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 TMX4Q9H1E5 349 aaPredicted RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 SH2D4AQ9H788 454 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 JADE2Q9NQC1 790 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 CEP72Q9P209 647 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 VPS18Q9P253 973 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 TRPC5Q9UL62 973 aaPredicted RBP8.27□□□□□ -1.09
CFDP1-202ENST00000562602 SIK3Q9Y2K2 1263 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 COL4A3BPQ9Y5P4 624 aa8.27□□□□□ -1.09
CFDP1-202ENST00000562602 IGKV6D-41A0A0C4DH26 115 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 GRID2IPA4D2P6 1211 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 ERICH4A6NGS2 130 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 WTIPA6NIX2 430 aaPredicted RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 BTNL10A8MVZ5 291 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 GOLGA8KD6RF30 607 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 ZBTB5O15062 677 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SPTLC1O15269 473 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 FOSP01100 380 aaPredicted RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 ATP1A1P05023 1023 aaKnown RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SERPING1P05155 500 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 LMAN1P49257 510 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 KIF11P52732 1056 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 HNRNPH2P55795 449 aaKnown RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 RHBDL3P58872 404 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 GPSM2P81274 684 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 GABPAQ06546 454 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SLC20A2Q08357 652 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 EHHADHQ08426 723 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 ZNF543Q08ER8 600 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 AP3B2Q13367 1082 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 NFIXQ14938 502 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SLC35G1Q2M3R5 365 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 EDRF1Q3B7T1 1238 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 CFAP221Q4G0U5 840 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 MFSD14BQ5SR56 506 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SFMBT2Q5VUG0 894 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 PDXDC1Q6P996 788 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 HHIPL2Q6UWX4 724 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SP8Q8IXZ3 490 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 KIAA0895Q8NCT3 520 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 AFAP1L1Q8TED9 768 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SNX29Q8TEQ0 813 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 DCAF4Q8WV16 495 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 EHD4Q9H223 541 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 EPC1Q9H2F5 836 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 DHX36Q9H2U1 1008 aaKnown RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SEMA6BQ9H3T3 888 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 MMRN2Q9H8L6 949 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 ST7Q9NRC1 585 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 BLOC1S4Q9NUP1 217 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 AGPAT5Q9NUQ2 364 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 BIN2Q9UBW5 565 aaPredicted RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 DDX25Q9UHL0 483 aaKnown RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SAP30BPQ9UHR5 308 aaKnown RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 SYNPO2Q9UMS6 1093 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 MYH13Q9UKX3 1938 aa8.26□□□□□ -1.09
CFDP1-202ENST00000562602 TNRC6CQ9HCJ0 1690 aaKnown RBP8.26□□□□□ -1.09
CFDP1-202ENST00000562602 CYP3A7-CYP3A51PA0A087WV96 503 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 KLRG2A4D1S0 409 aaPredicted RBP8.25□□□□□ -1.09
CFDP1-202ENST00000562602 MYMKA6NI61 221 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 USP17L5A8MUK1 530 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 CETN3O15182 167 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 GOLGA8HP0CJ92 632 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 CAPN2P17655 700 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 CYP3A7P24462 503 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 EPS15P42566 896 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 TNNT3P45378 269 aaPredicted RBP8.25□□□□□ -1.09
CFDP1-202ENST00000562602 CLK2P49760 499 aaKnown RBP8.25□□□□□ -1.09
CFDP1-202ENST00000562602 EPHB4P54760 987 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 PPFIA1Q13136 1202 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 CLUL1Q15846 466 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 CCDC40Q4G0X9 1142 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 FAM26FQ5R3K3 315 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 NCAPH2Q6IBW4 605 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 RRAGAQ7L523 313 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 C2CD5Q86YS7 1000 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 IFT20Q8IY31 132 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 NOA1Q8NC60 698 aaKnown RBP8.25□□□□□ -1.09
CFDP1-202ENST00000562602 LMBR1Q8WVP7 490 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 MTMR8Q96EF0 704 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 CALR3Q96L12 384 aaKnown RBP8.25□□□□□ -1.09
CFDP1-202ENST00000562602 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 MMS19Q96T76 1030 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 PLIN2Q99541 437 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 PSTPIP2Q9H939 334 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 METTL14Q9HCE5 456 aaKnown RBP8.25□□□□□ -1.09
CFDP1-202ENST00000562602 VAT1LQ9HCJ6 419 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 SLC39A2Q9NP94 309 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 PANK4Q9NVE7 773 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 SERPINB13Q9UIV8 391 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 PCDHA12Q9UN75 941 aa8.25□□□□□ -1.09
CFDP1-202ENST00000562602 SNED1Q8TER0 1413 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms