RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PTPROQ16827 1216 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 BMP2KLQ5H9B9 411 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 FBXO47Q5MNV8 452 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 IL17RAQ96F46 866 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 NEK1Q96PY6 1258 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 SLC9A2Q9UBY0 812 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 CDY2AQ9Y6F7 541 aa19.11■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 BRWD1Q9NSI6 2320 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 INSRRP14616 1297 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 NAPAP54920 295 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ADCK5Q3MIX3 580 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 TIGD5Q53EQ6 642 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 SYNE3Q6ZMZ3 975 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 TSHZ1Q6ZSZ6 1077 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 RSPH3Q86UC2 560 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 BANK1Q8NDB2 785 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 AGO3Q9H9G7 860 aaKnown RBP19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 RIC8AQ9NPQ8 531 aa19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 RBM28Q9NW13 759 aaKnown RBP19.1■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ADGRA3Q8IWK6 1321 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 STXBP3O00186 592 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ENPP3O14638 875 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ARP10275 920 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 IL9P15248 144 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ACTR2P61160 394 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 MRPS6P82932 125 aaKnown RBP19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 ITGB3BPQ13352 177 aaPredicted RBP19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 RTN1Q16799 776 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 TCEAL5Q5H9L2 206 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 RNF20Q5VTR2 975 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 PPP1R18Q6NYC8 613 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 RASEFQ8IZ41 740 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 FIBCD1Q8N539 461 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 NEK9Q8TD19 979 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 LINC01599Q8WXQ3 324 aa19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 FAM49AQ9H0Q0 323 aaPredicted RBP19.09■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 NFASCO94856 1347 aa19.08■□□□□ 0.65
VPS9D1-AS1-201ENST00000562298 C5orf67F2Z3F1 127 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ZBTB43O43298 467 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CTNNB1P35222 781 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 COL19A1Q14993 1142 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CEP55Q53EZ4 464 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 DHX32Q7L7V1 743 aaKnown RBP19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TRAPPC12Q8WVT3 735 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ZNF689Q96CS4 500 aaPredicted RBP19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ANO3Q9BYT9 981 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 AZI2Q9H6S1 392 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 AGO4Q9HCK5 861 aaKnown RBP19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 C11orf16Q9NQ32 467 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 FAM217BQ9NTX9 383 aaPredicted RBP19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TMEM260Q9NX78 707 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TRPC6Q9Y210 931 aa19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 V9GY48 417 aaPredicted RBP19.08■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 RRN3P2A6NIE6 340 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 H3BQ06 376 aaPredicted RBP19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CD52P31358 61 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CLK2P49760 499 aaKnown RBP19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ADCY7P51828 1080 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TMEM62Q0P6H9 643 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PLCB4Q15147 1175 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TSGA10IPQ3SY00 556 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PTCRAQ6ISU1 281 aaPredicted RBP19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TEX2Q8IWB9 1127 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 FAM178BQ8IXR5 827 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CLP1Q92989 425 aaKnown RBP19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 SDF4Q9BRK5 362 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 LRFN3Q9BTN0 628 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 NSUN3Q9H649 340 aaKnown RBP19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 BARHL2Q9NY43 387 aa19.07■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 SMCO2A6NFE2 343 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 GRXCR2A6NFK2 248 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 FOSP01100 380 aaPredicted RBP19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 RPLP2P05387 115 aaKnown RBP19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CDC27P30260 824 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 BMPR1AP36894 532 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 SREBF1P36956 1147 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 STAT5BP51692 787 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 IER5Q5VY09 327 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PLPPR4Q7Z2D5 763 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 RTN4RL1Q86UN2 441 aaPredicted RBP19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CRIPAKQ8N1N5 446 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PABPC5Q96DU9 382 aaKnown RBP19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 PCDHA2Q9Y5H9 948 aa19.06■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 TTC3P53804 2025 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 KLF18A0A0U1RQI7 1052 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 GOLGA8AA7E2F4 631 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 GOLGA8BA8MQT2 603 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 hCG_1984214I3L0E3 225 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 MEIS1O00470 390 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 GRM6O15303 877 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 DGKIO75912 1065 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ATG7O95352 703 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 CCNE2O96020 404 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 RB1P06400 928 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 AP3B2Q13367 1082 aa19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 BTG3Q14201 252 aaPredicted RBP19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 ZNF713Q8N859 430 aaPredicted RBP19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 C11orf84Q9BUA3 381 aaPredicted RBP19.05■□□□□ 0.64
VPS9D1-AS1-201ENST00000562298 RWDD3Q9Y3V2 267 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms