RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 RBM28Q9NW13 759 aaKnown RBP14.36□□□□□ -0.11
HERC2-202ENST00000562136 TUBE1Q9UJT0 475 aa14.36□□□□□ -0.11
HERC2-202ENST00000562136 MYH9P35579 1960 aaKnown RBP14.36□□□□□ -0.11
HERC2-202ENST00000562136 IGKV6D-21A0A0A0MT36 114 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 RRN3P2A6NIE6 340 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 hCG_1984214I3L0E3 225 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 MEIS1O00470 390 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 ENPP3O14638 875 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 FOSP01100 380 aaPredicted RBP14.35□□□□□ -0.11
HERC2-202ENST00000562136 RB1P06400 928 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 CLK2P49760 499 aaKnown RBP14.35□□□□□ -0.11
HERC2-202ENST00000562136 SP4Q02446 784 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 PTPROQ16827 1216 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 TIGD5Q53EQ6 642 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 RNF20Q5VTR2 975 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 RSPH3Q86UC2 560 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 MICU3Q86XE3 530 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 ZNF713Q8N859 430 aaPredicted RBP14.35□□□□□ -0.11
HERC2-202ENST00000562136 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.35□□□□□ -0.11
HERC2-202ENST00000562136 CYP2W1Q8TAV3 490 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 CRYGNQ8WXF5 182 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 IL17RAQ96F46 866 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 NEK1Q96PY6 1258 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 JPH1Q9HDC5 661 aaPredicted RBP14.35□□□□□ -0.11
HERC2-202ENST00000562136 CD320Q9NPF0 282 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 ANO2Q9NQ90 1003 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 SLC9A2Q9UBY0 812 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 ARIH1Q9Y4X5 557 aaPredicted RBP14.35□□□□□ -0.11
HERC2-202ENST00000562136 TRIOO75962 3097 aa14.35□□□□□ -0.11
HERC2-202ENST00000562136 GHRP10912 638 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 INSRRP14616 1297 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 GPM6BQ13491 265 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 CEP55Q53EZ4 464 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 TSHZ1Q6ZSZ6 1077 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 DHX32Q7L7V1 743 aaKnown RBP14.34□□□□□ -0.11
HERC2-202ENST00000562136 NIPA1Q7RTP0 329 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 HEATR3Q7Z4Q2 680 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 FAM178BQ8IXR5 827 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 CCDC82Q8N4S0 544 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 DNAJB3Q8WWF6 145 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 GLG1Q92896 1179 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
HERC2-202ENST00000562136 KCNB2Q92953 911 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 EPHX3Q9H6B9 360 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 BARHL2Q9NY43 387 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 PCDHA2Q9Y5H9 948 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
HERC2-202ENST00000562136 GRXCR2A6NFK2 248 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 PI4K2BG5E9Z4 385 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 STXBP3O00186 592 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 GPR37L1O60883 481 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 DGKIO75912 1065 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 UPP2O95045 317 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 BMPR1AP36894 532 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 SREBF1P36956 1147 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 ACTR2P61160 394 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 MRPS6P82932 125 aaKnown RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 AP3B2Q13367 1082 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 PLCB4Q15147 1175 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 CTC1Q2NKJ3 1217 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 RTN4RL1Q86UN2 441 aaPredicted RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 LINC01599Q8WXQ3 324 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 TNPO1Q92973 898 aaKnown RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 PABPC5Q96DU9 382 aaKnown RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 LMAN2LQ9H0V9 348 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 GLT8D2Q9H1C3 349 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 AGO3Q9H9G7 860 aaKnown RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 C11orf16Q9NQ32 467 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 CDY2AQ9Y6F7 541 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 ADGRA3Q8IWK6 1321 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 FNDC1Q4ZHG4 1894 aaPredicted RBP14.33□□□□□ -0.12
HERC2-202ENST00000562136 NID2Q14112 1375 aa14.33□□□□□ -0.12
HERC2-202ENST00000562136 ZBTB43O43298 467 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 ARP10275 920 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 KCNA5P22460 613 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 MARK3P27448 753 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 SLC26A2P50443 739 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 RTN1Q16799 776 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 ADCK5Q3MIX3 580 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 NME8Q8N427 588 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 FBXL16Q8N461 479 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 FIBCD1Q8N539 461 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 LRFN3Q9BTN0 628 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 FTHL17Q9BXU8 183 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 ANO3Q9BYT9 981 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 NSUN3Q9H649 340 aaKnown RBP14.32□□□□□ -0.12
HERC2-202ENST00000562136 AGO4Q9HCK5 861 aaKnown RBP14.32□□□□□ -0.12
HERC2-202ENST00000562136 RAPGEFL1Q9UHV5 662 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
HERC2-202ENST00000562136 IGSF9BQ9UPX0 1349 aa14.32□□□□□ -0.12
HERC2-202ENST00000562136 SMIM35A0A1B0GVV1 85 aa14.31□□□□□ -0.12
HERC2-202ENST00000562136 ESYT2A0FGR8 921 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms