RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HDAC6Q9UBN7 1215 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 COL1A2P08123 1366 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 TRIM43BA6NCK2 446 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 DDX39AO00148 427 aaKnown RBP15.13■□□□□ 0.01
CDH1-204ENST00000562118 ZNF862O60290 1169 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 PQBP1O60828 265 aaKnown RBP15.13■□□□□ 0.01
CDH1-204ENST00000562118 OR52Z1P0C646 297 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 SMIM10L2AP0DMW4 78 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 SMIM10L2BP0DMW5 78 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 FXR2P51116 673 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDH1-204ENST00000562118 PLCB4Q15147 1175 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 ZNF174Q15697 407 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 TRIM71Q2Q1W2 868 aaKnown RBP15.13■□□□□ 0.01
CDH1-204ENST00000562118 MARCH8Q5T0T0 291 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 MCTP1Q6DN14 999 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 RPAINQ86UA6 219 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 ATP8B4Q8TF62 1192 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 TRIM43Q96BQ3 446 aaPredicted RBP15.13■□□□□ 0.01
CDH1-204ENST00000562118 PRO3102Q9H379 93 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 ZSCAN16Q9H4T2 348 aaPredicted RBP15.13■□□□□ 0.01
CDH1-204ENST00000562118 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 ATP11BQ9Y2G3 1177 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 NRCAMQ92823 1304 aa15.13■□□□□ 0.01
CDH1-204ENST00000562118 VPS37CA5D8V6 355 aaPredicted RBP15.12■□□□□ 0.01
CDH1-204ENST00000562118 DCDC2CA8MYV0 355 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 LYPLA2O95372 231 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 BAG4O95429 457 aaKnown RBP15.12■□□□□ 0.01
CDH1-204ENST00000562118 BECN1Q14457 450 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 EPHA7Q15375 998 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 UGCGQ16739 394 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 UTP14CQ5TAP6 766 aaKnown RBP15.12■□□□□ 0.01
CDH1-204ENST00000562118 FAM160B1Q5W0V3 765 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 SH3RF1Q7Z6J0 888 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 SERINC5Q86VE9 423 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 C7orf61Q8IZ16 206 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 IGSF22Q8N9C0 903 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 DHX38Q92620 1227 aaKnown RBP15.12■□□□□ 0.01
CDH1-204ENST00000562118 UIMC1Q96RL1 719 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 CEP89Q96ST8 783 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 HSD17B14Q9BPX1 270 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 TRPV6Q9H1D0 765 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 AZI2Q9H6S1 392 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 TTC12Q9H892 705 aaPredicted RBP15.12■□□□□ 0.01
CDH1-204ENST00000562118 TRMT13Q9NUP7 481 aaKnown RBP15.12■□□□□ 0.01
CDH1-204ENST00000562118 PCDHA12Q9UN75 941 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
CDH1-204ENST00000562118 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 TLR3O15455 904 aaKnown RBP15.11■□□□□ 0.01
CDH1-204ENST00000562118 BRD1O95696 1058 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 ITGB8P26012 769 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 PTGDRQ13258 359 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 PTK7Q13308 1070 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 PKP1Q13835 747 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 TARBP2Q15633 366 aaKnown RBP15.11■□□□□ 0.01
CDH1-204ENST00000562118 IL17AQ16552 155 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 ARL6IP4Q66PJ3 421 aaKnown RBP15.11■□□□□ 0.01
CDH1-204ENST00000562118 SWSAP1Q6NVH7 229 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 C7orf31Q8N865 590 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 NEK9Q8TD19 979 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 BBXQ8WY36 941 aaPredicted RBP15.11■□□□□ 0.01
CDH1-204ENST00000562118 DPF3Q92784 378 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 GLG1Q92896 1179 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 VTI1AQ96AJ9 217 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 NOC4LQ9BVI4 516 aaKnown RBP15.11■□□□□ 0.01
CDH1-204ENST00000562118 GABBR1Q9UBS5 961 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 TCEAL9Q9UHQ7 104 aa15.11■□□□□ 0.01
CDH1-204ENST00000562118 LAMA3Q16787 3333 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 LAMA2P24043 3122 aaKnown RBP15.1■□□□□ 0.01
CDH1-204ENST00000562118 POTEB3A0JP26 581 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 C17orf102A2RUQ5 167 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 HBP1O60381 514 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 CAND2O75155 1236 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 BMP15O95972 392 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 P4HBP07237 508 aaKnown RBP15.1■□□□□ 0.01
CDH1-204ENST00000562118 ZSCAN22P10073 491 aaPredicted RBP15.1■□□□□ 0.01
CDH1-204ENST00000562118 PDIA5Q14554 519 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 PTPAQ15257 358 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 PDXDC2PQ6P474 469 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 TRAF7Q6Q0C0 670 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 POTEBQ6S5H4 581 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 FERMT3Q86UX7 667 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 C4orf19Q8IY42 314 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 LINC01465Q8N7H1 131 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 CAGE1Q8TC20 777 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 ATP6V0A1Q93050 837 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 FAM167AQ96KS9 214 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 NIFKQ9BYG3 293 aaKnown RBP15.1■□□□□ 0.01
CDH1-204ENST00000562118 WRAP73Q9P2S5 460 aaPredicted RBP15.1■□□□□ 0.01
CDH1-204ENST00000562118 ZDHHC9Q9Y397 364 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 SCN5AQ14524 2016 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 EVPLQ92817 2033 aa15.1■□□□□ 0.01
CDH1-204ENST00000562118 RRN3P2A6NIE6 340 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 H0YGN5 161 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 CHMP2AO43633 222 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 SLITRK3O94933 977 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 F13A1P00488 732 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 TIMP1P01033 207 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms