RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CRYGNQ8WXF5 182 aa19.6■□□□□ 0.73
CDC42BPB-208ENST00000561271 UIMC1Q96RL1 719 aa19.6■□□□□ 0.73
CDC42BPB-208ENST00000561271 TM6SF1Q9BZW5 370 aa19.6■□□□□ 0.73
CDC42BPB-208ENST00000561271 SMARCAD1Q9H4L7 1026 aa19.6■□□□□ 0.73
CDC42BPB-208ENST00000561271 CERS4Q9HA82 394 aa19.6■□□□□ 0.73
CDC42BPB-208ENST00000561271 IGLV3-22A0A075B6J6 115 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 ABHD14A-ACY1A0A1B0GW23 586 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 TLL1O43897 1013 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 CAND2O75155 1236 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 STK3Q13188 491 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 PLA2G4DQ86XP0 818 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 DBF4BQ8NFT6 615 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 TUBE1Q9UJT0 475 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 ARID2Q68CP9 1835 aa19.59■□□□□ 0.73
CDC42BPB-208ENST00000561271 LCHNA4D1U4 455 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 CCNE2O96020 404 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 IGFBP4P22692 258 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 GNA11P29992 359 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 IGBP1P78318 339 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 TAP1Q03518 808 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 IKBKEQ14164 716 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 PLEKHG4Q58EX7 1191 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 NIPA1Q7RTP0 329 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 SPRED2Q7Z698 418 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 PPM1EQ8WY54 764 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 ZBTB10Q96DT7 871 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 AZI2Q9H6S1 392 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 PDRG1Q9NUG6 133 aa19.58■□□□□ 0.72
CDC42BPB-208ENST00000561271 FNDC1Q4ZHG4 1894 aaPredicted RBP19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 KIF28PB7ZC32 967 aa19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 EFCAB14O75071 495 aa19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 CYP3A4P08684 503 aa19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 FAM117BQ6P1L5 589 aa19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 TRIM22Q8IYM9 498 aa19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 ZBED2Q9BTP6 218 aa19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 TRPC6Q9Y210 931 aa19.57■□□□□ 0.72
CDC42BPB-208ENST00000561271 NCOR1O75376 2440 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 EPOPA6NHQ4 379 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 DLL1O00548 723 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 CPLX1O14810 134 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 GJB5O95377 273 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 MKRN4PQ13434 485 aaPredicted RBP19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 PLCB4Q15147 1175 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 MARCH8Q5T0T0 291 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 TAF2Q6P1X5 1199 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 BICD2Q8TD16 824 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 TRAPPC12Q8WVT3 735 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 SEPT8Q92599 483 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 ZNF274Q96GC6 653 aaPredicted RBP19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 VCANP13611 3396 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 TTC28Q96AY4 2481 aa19.56■□□□□ 0.72
CDC42BPB-208ENST00000561271 MYO7AQ13402 2215 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 MBLAC1A4D2B0 266 aaPredicted RBP19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 RFXAPO00287 272 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 IPO5O00410 1097 aaKnown RBP19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 INSRRP14616 1297 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 SETQ01105 290 aaPredicted RBP19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 SSRP1Q08945 709 aaKnown RBP19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 FAM26DQ5JW98 314 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 MCTP2Q6DN12 878 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 MYOCDQ8IZQ8 938 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 DNAJB3Q8WWF6 145 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 ARNTL2Q8WYA1 636 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 AIFM3Q96NN9 605 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 FAM49AQ9H0Q0 323 aaPredicted RBP19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 PRDM6Q9NQX0 595 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 COL4A6Q14031 1691 aa19.55■□□□□ 0.72
CDC42BPB-208ENST00000561271 DHX15O43143 795 aaKnown RBP19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 DEXIO95424 95 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 CHRNA1P02708 482 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 STAT5BP51692 787 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 NLRP5P59047 1200 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 CCDC85BQ15834 202 aaPredicted RBP19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 PRR16Q569H4 304 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 CCDC60Q8IWA6 550 aaPredicted RBP19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 MICALL1Q8N3F8 863 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 ZNF577Q9BSK1 485 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 SH3GLB2Q9NR46 395 aa19.54■□□□□ 0.72
CDC42BPB-208ENST00000561271 BACH1O14867 736 aa19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 ATG7O95352 703 aa19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 AMHP03971 560 aa19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 GHRP10912 638 aa19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 MGAT3Q09327 533 aa19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 PLPPR4Q7Z2D5 763 aa19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 LENG9Q96B70 501 aa19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 IFIH1Q9BYX4 1025 aaKnown RBP19.53■□□□□ 0.72
CDC42BPB-208ENST00000561271 IGKV6D-21A0A0A0MT36 114 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 POTEB3A0JP26 581 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 RRN3P2A6NIE6 340 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 DTNBO60941 627 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 SCRN1Q12765 414 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 FAM160B1Q5W0V3 765 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 CPLX2Q6PUV4 134 aaKnown RBP19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 POTEBQ6S5H4 581 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 ABHD15Q6UXT9 468 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 RPAINQ86UA6 219 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 RSPH3Q86UC2 560 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 RAD9AQ99638 391 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms