RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ATP4AP20648 1035 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 ATP2C1P98194 919 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 SP4Q02446 784 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 FAAP100Q0VG06 881 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 PTGDRQ13258 359 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 PDIA5Q14554 519 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 EPHA7Q15375 998 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 ZNF174Q15697 407 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 UTP14CQ5TAP6 766 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 FAM160B1Q5W0V3 765 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 ARL6IP4Q66PJ3 421 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 SWSAP1Q6NVH7 229 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 MIER3Q7Z3K6 550 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 TRIM50Q86XT4 487 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 GLG1Q92896 1179 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 UIMC1Q96RL1 719 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 RNPEPQ9H4A4 650 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 AZI2Q9H6S1 392 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 ZNF302Q9NR11 478 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 HDAC6Q9UBN7 1215 aa10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-221ENST00000561055 NRCAMQ92823 1304 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 TET1Q8NFU7 2136 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 KIAA0355O15063 1070 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 MARCH6O60337 910 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 HBP1O60381 514 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 B4GALT4O60513 344 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 BMP15O95972 392 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 SMIM10L2AP0DMW4 78 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 SMIM10L2BP0DMW5 78 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 ZSCAN22P10073 491 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 ATP2B1P20020 1258 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 TXKP42681 527 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 PLCB4Q15147 1175 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 FERMT3Q86UX7 667 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 C7orf31Q8N865 590 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 DPF3Q92784 378 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 CTAGE1Q96RT6 745 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 HSD17B14Q9BPX1 270 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 TBX21Q9UL17 535 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 ATP11BQ9Y2G3 1177 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 NR2E3Q9Y5X4 410 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 COL1A2P08123 1366 aa10.84□□□□□ -0.67
RABGGTA-221ENST00000561055 MBLAC1A4D2B0 266 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 RRN3P2A6NIE6 340 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 BACH1O14867 736 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 ZNF862O60290 1169 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 DKC1O60832 514 aaKnown RBP eCLIP10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 STBD1O95210 358 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 P4HBP07237 508 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 CLTBP09497 229 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 GNAT1P11488 350 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 DDIT3P35638 169 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 RBL2Q08999 1139 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 HIC1Q14526 733 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 NBR1Q14596 966 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 GDF6Q6KF10 455 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 PDXDC2PQ6P474 469 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 RPAINQ86UA6 219 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 NEK9Q8TD19 979 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 ATP8B4Q8TF62 1192 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 ATP6V0A1Q93050 837 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 FAM167AQ96KS9 214 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 SAMM50Q9Y512 469 aa10.83□□□□□ -0.68
RABGGTA-221ENST00000561055 POTEB3A0JP26 581 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 C17orf102A2RUQ5 167 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 PQBP1O60828 265 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 SLITRK3O94933 977 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 LYPLA2O95372 231 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 BRD1O95696 1058 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 F13A1P00488 732 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 INSRRP14616 1297 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 MUTP22033 750 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 QARSP47897 775 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 PSMC5P62195 406 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 PTK7Q13308 1070 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 PTPAQ15257 358 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 PTGISQ16647 500 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 FAM47CQ5HY64 1035 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 ZNF484Q5JVG2 852 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 MARCH8Q5T0T0 291 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 ATL3Q6DD88 541 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 POTEBQ6S5H4 581 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 SERINC5Q86VE9 423 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 C4orf19Q8IY42 314 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 C7orf61Q8IZ16 206 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 RAB34Q9BZG1 259 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 TRPV6Q9H1D0 765 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 NRBP2Q9NSY0 501 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 TRMT13Q9NUP7 481 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 TMEM39AQ9NV64 488 aa10.82□□□□□ -0.68
RABGGTA-221ENST00000561055 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms