RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 MXRA8Q9BRK3 442 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 LXNQ9BS40 222 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 L2HGDHQ9H9P8 463 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 SSC5DA1L4H1 1573 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 VGLL3A8MV65 326 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 ADM5C9JUS6 153 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 GCNT3O95395 438 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 HOXD13P35453 343 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 PSMD2Q13200 908 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 ITGB3BPQ13352 177 aaPredicted RBP15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 COBLL1Q53SF7 1204 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 RINT1Q6NUQ1 792 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 WDR59Q6PJI9 974 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 TESPA1A2RU30 521 aaPredicted RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 PLEKP08567 350 aaPredicted RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 NMT1P30419 496 aaKnown RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 SEMA3FQ13275 785 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 ZC2HC1CQ53FD0 456 aaPredicted RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 SNRNP48Q6IEG0 339 aaKnown RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 KCTD10Q9H3F6 313 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 EHMT1Q9H9B1 1298 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 RNF146Q9NTX7 359 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 A0A1W2PQC6 194 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 CLIC2O15247 247 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 TBCAO75347 108 aaKnown RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 TFRCP02786 760 aaKnown RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 LMNB1P20700 586 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 PPP1R2P41236 205 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 SP4Q02446 784 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 PPP2R5CQ13362 524 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 BAATQ14032 418 aaPredicted RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 APOBEC3FQ8IUX4 373 aaKnown RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 OR8K1Q8NGG5 319 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 KLRG1Q96E93 195 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 RMDN3Q96TC7 470 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 POLR3CQ9BUI4 534 aaPredicted RBP15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 TTYH3Q9C0H2 523 aa15.58■□□□□ 0.08
CARMIL3-203ENST00000560349 FRMD3A2A2Y4 597 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 CCP110O43303 1012 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 ATP9AO75110 1047 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 EYA4O95677 639 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 FKBP3Q00688 224 aaKnown RBP15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 TKFCQ3LXA3 575 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 CYP26C1Q6V0L0 522 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 TEKT3Q9BXF9 490 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 RNF181Q9P0P0 153 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 CAPN11Q9UMQ6 739 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 ZBED4O75132 1171 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 NR2F2P24468 414 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 MTMR1Q13613 665 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 TRIM14Q14142 442 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 MAN2A1Q16706 1144 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 RNF207Q6ZRF8 634 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 GPC2Q8N158 579 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 MYCT1Q8N699 235 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 TELO2Q9Y4R8 837 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 COL4A3BPQ9Y5P4 624 aa15.57■□□□□ 0.08
CARMIL3-203ENST00000560349 TULP1O00294 542 aaPredicted RBP15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 ADAM9Q13443 819 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 ERCC6LQ2NKX8 1250 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 MOB2Q70IA6 237 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 NAA15Q9BXJ9 866 aaKnown RBP15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 REXO2Q9Y3B8 237 aaKnown RBP15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 USP14P54578 494 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 PGM5Q15124 567 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 MIER3Q7Z3K6 550 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 TMTC1Q8IUR5 882 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 CCDC51Q96ER9 411 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 PITPNM2Q9BZ72 1349 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 NLRC4Q9NPP4 1024 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 FAM53CQ9NYF3 392 aa15.56■□□□□ 0.08
CARMIL3-203ENST00000560349 FAM13AO94988 1023 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 SETQ01105 290 aaPredicted RBP15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 CYP27A1Q02318 531 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 COG2Q14746 738 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 TMEM132BQ14DG7 1078 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 UGCGQ16739 394 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 DNAJC7Q99615 494 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 ZNF112Q9UJU3 913 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 SIK3Q9Y2K2 1263 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 RPTORQ8N122 1335 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 DHX15O43143 795 aaKnown RBP15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 NDUFA10O95299 355 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 CASP4P49662 377 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 ENOX2Q16206 610 aaKnown RBP15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 ARHGAP29Q52LW3 1261 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 ARHGEF16Q5VV41 709 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 KRT26Q7Z3Y9 468 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 MCF2L2Q86YR7 1114 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 ZNF446Q9NWS9 450 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 DOCK1Q14185 1865 aa15.55■□□□□ 0.08
CARMIL3-203ENST00000560349 VGLL4Q14135 290 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 ZNF569Q5MCW4 686 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 C1orf186Q6ZWK4 172 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 ERGIC2Q96RQ1 377 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 AS3MTQ9HBK9 375 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 TUFT1Q9NNX1 390 aa15.54■□□□□ 0.08
CARMIL3-203ENST00000560349 RBBP6Q7Z6E9 1792 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms