RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 IQSEC1Q6DN90 963 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 APOA5Q6Q788 366 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 CXCL17Q6UXB2 119 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 ANKRD33Q7Z3H0 272 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 SGMS1Q86VZ5 419 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 CMTR1Q8N1G2 835 aaKnown RBP7.51□□□□□ -1.21
IRF9-208ENST00000560311 IL31RAQ8NI17 732 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 COPS5Q92905 334 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 TRIM43Q96BQ3 446 aaPredicted RBP7.51□□□□□ -1.21
IRF9-208ENST00000560311 ZNF837Q96EG3 531 aaPredicted RBP7.51□□□□□ -1.21
IRF9-208ENST00000560311 RRP36Q96EU6 259 aaKnown RBP7.51□□□□□ -1.21
IRF9-208ENST00000560311 JAKMIP1Q96N16 626 aaKnown RBP7.51□□□□□ -1.21
IRF9-208ENST00000560311 IWS1Q96ST2 819 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 LZTS2Q9BRK4 669 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 PPP4R2Q9NY27 417 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 TBX21Q9UL17 535 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 Q9Y3F1 56 aa7.51□□□□□ -1.21
IRF9-208ENST00000560311 SZT2Q5T011 3432 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 ZNFX1Q9P2E3 1918 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 NID2Q14112 1375 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 MCM3APO60318 1980 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 KLF18A0A0U1RQI7 1052 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 KRBA1A5PL33 1030 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 GOLGA8AA7E2F4 631 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 GOLGA8BA8MQT2 603 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 DCDC2CA8MYV0 355 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 ARVCFO00192 962 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 KIAA0355O15063 1070 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 ZBTB43O43298 467 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 CABYRO75952 493 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 MYL3P08590 195 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 HMGB1P09429 215 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 TXNP10599 105 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 CPA1P15085 419 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 ITGB8P26012 769 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 HSPA4P34932 840 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 GNAQP50148 359 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 PSMC6P62333 389 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 FAAP100Q0VG06 881 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 PGM5Q15124 567 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 STXBP2Q15833 593 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 QPCTQ16769 361 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 RTN1Q16799 776 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 TSGA10IPQ3SY00 556 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 INTS6LQ5JSJ4 861 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 ERICH6BQ5W0A0 696 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 SEPT14Q6ZU15 432 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 DHX32Q7L7V1 743 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 KRTAP1-3Q8IUG1 177 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 FAM126BQ8IXS8 530 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 TMTC2Q8N394 836 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 SRBD1Q8N5C6 995 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 BADQ92934 168 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 KCNB2Q92953 911 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 TOX2Q96NM4 488 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 PDCD2LQ9BRP1 358 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 RBM28Q9NW13 759 aaKnown RBP7.5□□□□□ -1.21
IRF9-208ENST00000560311 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 SNX14Q9Y5W7 946 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 MRVI1Q9Y6F6 885 aa7.5□□□□□ -1.21
IRF9-208ENST00000560311 hCG_1642624A0A1W2PR95 340 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 TLR3O15455 904 aaKnown RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 GH1P01241 217 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 MMP3P08254 477 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 MYCLP12524 364 aaPredicted RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 RHOQP17081 205 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 UBA1P22314 1058 aaKnown RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 SMARCA1P28370 1054 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 CCND2P30279 289 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 CDK7P50613 346 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 RCAN1P53805 252 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 FGD1P98174 961 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 PURAQ00577 322 aaKnown RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 EXOSC10Q01780 885 aaKnown RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 ARHGAP1Q07960 439 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 ITGA7Q13683 1181 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 LY6KQ17RY6 165 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 BRDTQ58F21 947 aaPredicted RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 CCDC62Q6P9F0 684 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 SYNE3Q6ZMZ3 975 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 LYSMD3Q7Z3D4 306 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 HEATR3Q7Z4Q2 680 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 FCHSD1Q86WN1 690 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 SAMD3Q8N6K7 520 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 FANCBQ8NB91 859 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 SLC43A3Q8NBI5 491 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 GPKOWQ92917 476 aaPredicted RBP eCLIP7.49□□□□□ -1.21
IRF9-208ENST00000560311 MTG1Q9BT17 334 aaPredicted RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 TMPRSS4Q9NRS4 437 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 MAP3K20Q9NYL2 800 aaKnown RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 NAP1L2Q9ULW6 460 aaPredicted RBP7.49□□□□□ -1.21
IRF9-208ENST00000560311 GRIN2DO15399 1336 aa7.49□□□□□ -1.21
IRF9-208ENST00000560311 A6NJR5 290 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 PIK3CDO00329 1044 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 SORBS3O60504 671 aa7.48□□□□□ -1.21
IRF9-208ENST00000560311 B4GALT4O60513 344 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms