RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 NASPP49321 788 aaPredicted RBP24.51■■□□□ 1.51
SNX1-210ENST00000560260 FXR2P51116 673 aaKnown RBP eCLIP24.51■■□□□ 1.51
SNX1-210ENST00000560260 STAT5BP51692 787 aa24.51■■□□□ 1.51
SNX1-210ENST00000560260 GLG1Q92896 1179 aa24.51■■□□□ 1.51
SNX1-210ENST00000560260 RNPEPQ9H4A4 650 aa24.51■■□□□ 1.51
SNX1-210ENST00000560260 SMARCAD1Q9H4L7 1026 aa24.51■■□□□ 1.51
SNX1-210ENST00000560260 ZNF302Q9NR11 478 aa24.51■■□□□ 1.51
SNX1-210ENST00000560260 MAFBQ9Y5Q3 323 aaPredicted RBP24.51■■□□□ 1.51
SNX1-210ENST00000560260 ARVCFO00192 962 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 ZNF862O60290 1169 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 CDK7P50613 346 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 DNM1Q05193 864 aaKnown RBP24.5■■□□□ 1.51
SNX1-210ENST00000560260 GRIN1Q05586 938 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 HIC1Q14526 733 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 PLCB4Q15147 1175 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 EPHA7Q15375 998 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 TRIM60Q495X7 471 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 PLPPR4Q7Z2D5 763 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 BANK1Q8NDB2 785 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 KATNAL1Q9BW62 490 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 AZI2Q9H6S1 392 aa24.5■■□□□ 1.51
SNX1-210ENST00000560260 WRAP73Q9P2S5 460 aaPredicted RBP24.5■■□□□ 1.51
SNX1-210ENST00000560260 TFIP11Q9UBB9 837 aaKnown RBP24.5■■□□□ 1.51
SNX1-210ENST00000560260 ZNF215Q9UL58 517 aaPredicted RBP24.5■■□□□ 1.51
SNX1-210ENST00000560260 PP2D1A8MPX8 630 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 BMP15O95972 392 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 RTP1P59025 263 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 NUCB2P80303 420 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 FAM160B1Q5W0V3 765 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 PDXDC2PQ6P474 469 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 ZNF396Q96N95 335 aaPredicted RBP24.49■■□□□ 1.51
SNX1-210ENST00000560260 IPO9Q96P70 1041 aaKnown RBP24.49■■□□□ 1.51
SNX1-210ENST00000560260 ERAP1Q9NZ08 941 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 RGL1Q9NZL6 768 aa24.49■■□□□ 1.51
SNX1-210ENST00000560260 RGS19P49795 217 aa24.48■■□□□ 1.51
SNX1-210ENST00000560260 C1orf53Q5VUE5 145 aa24.48■■□□□ 1.51
SNX1-210ENST00000560260 IGSF22Q8N9C0 903 aa24.48■■□□□ 1.51
SNX1-210ENST00000560260 DYDC2Q96IM9 177 aa24.48■■□□□ 1.51
SNX1-210ENST00000560260 EIF2AK1Q9BQI3 630 aaKnown RBP24.48■■□□□ 1.51
SNX1-210ENST00000560260 HDAC6Q9UBN7 1215 aa24.48■■□□□ 1.51
SNX1-210ENST00000560260 CEP131Q9UPN4 1083 aa24.48■■□□□ 1.51
SNX1-210ENST00000560260 MYH9P35579 1960 aaKnown RBP24.48■■□□□ 1.51
SNX1-210ENST00000560260 VWA3AA6NCI4 1184 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 STBD1O95210 358 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 SMIM10L2AP0DMW4 78 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 SMIM10L2BP0DMW5 78 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 MARCKSP29966 332 aaPredicted RBP24.47■■□□□ 1.51
SNX1-210ENST00000560260 HOXC8P31273 242 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 CYP4A11Q02928 519 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 SLC39A14Q15043 492 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 TMEM266Q2M3C6 531 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 ARL6IP4Q66PJ3 421 aaKnown RBP24.47■■□□□ 1.51
SNX1-210ENST00000560260 NFRKBQ6P4R8 1299 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 DTHD1Q6ZMT9 781 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 SESTD1Q86VW0 696 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 LINC00301Q8NCQ3 95 aa24.47■■□□□ 1.51
SNX1-210ENST00000560260 FBXO2Q9UK22 296 aaPredicted RBP24.47■■□□□ 1.51
SNX1-210ENST00000560260 CIZ1Q9ULV3 898 aaPredicted RBP24.47■■□□□ 1.51
SNX1-210ENST00000560260 MORC2Q9Y6X9 1032 aaPredicted RBP24.47■■□□□ 1.51
SNX1-210ENST00000560260 PRKCEQ02156 737 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 FAM47CQ5HY64 1035 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 GDF6Q6KF10 455 aaPredicted RBP24.46■■□□□ 1.51
SNX1-210ENST00000560260 FAM126BQ8IXS8 530 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 CTAGE1Q96RT6 745 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 HSD17B14Q9BPX1 270 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 LXNQ9BS40 222 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 GTF2IRD1Q9UHL9 959 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 ATP11BQ9Y2G3 1177 aa24.46■■□□□ 1.51
SNX1-210ENST00000560260 TMEM150BA6NC51 233 aa24.45■■□□□ 1.5
SNX1-210ENST00000560260 PQBP1O60828 265 aaKnown RBP24.45■■□□□ 1.5
SNX1-210ENST00000560260 MED24O75448 989 aa24.45■■□□□ 1.5
SNX1-210ENST00000560260 P4HBP07237 508 aaKnown RBP24.45■■□□□ 1.5
SNX1-210ENST00000560260 TLE2Q04725 743 aa24.45■■□□□ 1.5
SNX1-210ENST00000560260 CTTNQ14247 550 aaKnown RBP24.45■■□□□ 1.5
SNX1-210ENST00000560260 ATP8B4Q8TF62 1192 aa24.45■■□□□ 1.5
SNX1-210ENST00000560260 TRMT13Q9NUP7 481 aaKnown RBP24.45■■□□□ 1.5
SNX1-210ENST00000560260 LRWD1Q9UFC0 647 aa24.45■■□□□ 1.5
SNX1-210ENST00000560260 POTEB3A0JP26 581 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 B4GALT4O60513 344 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 SLITRK3O94933 977 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 YEATS4O95619 227 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 OATP04181 439 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 SPATA31C1P0DKV0 1188 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 CDC25AP30304 524 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 QARSP47897 775 aaKnown RBP24.44■■□□□ 1.5
SNX1-210ENST00000560260 SLC26A2P50443 739 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 PSMC5P62195 406 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 ZNF200P98182 395 aaPredicted RBP24.44■■□□□ 1.5
SNX1-210ENST00000560260 STK38Q15208 465 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 POTEBQ6S5H4 581 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 TRMT1LQ7Z2T5 733 aaKnown RBP24.44■■□□□ 1.5
SNX1-210ENST00000560260 ANKRD33Q7Z3H0 272 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 C7orf31Q8N865 590 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 LMBR1Q8WVP7 490 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 ATP6V0A1Q93050 837 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 MMTAG2Q9BU76 263 aaKnown RBP24.44■■□□□ 1.5
SNX1-210ENST00000560260 TRPV6Q9H1D0 765 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 PCDH10Q9P2E7 1040 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 TRPC6Q9Y210 931 aa24.44■■□□□ 1.5
SNX1-210ENST00000560260 INSRRP14616 1297 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms