RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 METTL7BQ6UX53 244 aa13.63□□□□□ -0.23
HERC1-205ENST00000559886 BANK1Q8NDB2 785 aa13.63□□□□□ -0.23
HERC1-205ENST00000559886 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
HERC1-205ENST00000559886 TELO2Q9Y4R8 837 aa13.63□□□□□ -0.23
HERC1-205ENST00000559886 HSPA6P17066 643 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 QARSP47897 775 aaKnown RBP13.62□□□□□ -0.23
HERC1-205ENST00000559886 ACVR2BQ13705 512 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 GSE1Q14687 1217 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 CCL14Q16627 93 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 ABHD15Q6UXT9 468 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 GAS2L3Q86XJ1 694 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 NACC1Q96RE7 527 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 C7orf25Q9BPX7 421 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 ZSWIM4Q9H7M6 989 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 SAGE1Q9NXZ1 904 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 A0A087WWV3 80 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 SORBS3O60504 671 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 LYPLA2O95372 231 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 PSAPP07602 524 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 CAP1Q01518 475 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 SP4Q02446 784 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 GSDMAQ96QA5 445 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 TRIM9Q9C026 710 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 BLZF1Q9H2G9 400 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 MLXIPQ9HAP2 919 aa13.62□□□□□ -0.23
HERC1-205ENST00000559886 GPR25O00155 361 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 EYA4O95677 639 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 SUPT20HL2P0C7V6 817 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 SLC12A3P55017 1021 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 PSMC5P62195 406 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 DHX8Q14562 1220 aaKnown RBP13.61□□□□□ -0.23
HERC1-205ENST00000559886 MIS18BP1Q6P0N0 1132 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 SYT2Q8N9I0 419 aaPredicted RBP13.61□□□□□ -0.23
HERC1-205ENST00000559886 LRRC27Q9C0I9 530 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 GABRQQ9UN88 632 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 MYMKA6NI61 221 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 BIN1O00499 593 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 FLT3LGP49771 235 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 UGCGQ16739 394 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 TMEM63BQ5T3F8 832 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 DHX37Q8IY37 1157 aaKnown RBP13.61□□□□□ -0.23
HERC1-205ENST00000559886 C4orf19Q8IY42 314 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 PIGOQ8TEQ8 1089 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 MAN1B1Q9UKM7 699 aa13.61□□□□□ -0.23
HERC1-205ENST00000559886 IGKV6D-21A0A0A0MT36 114 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 ZBTB39O15060 712 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 ADCYAP1R1P41586 468 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 STX1AQ16623 288 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 IQSEC1Q6DN90 963 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 SWSAP1Q6NVH7 229 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 CCDC60Q8IWA6 550 aaPredicted RBP13.6□□□□□ -0.23
HERC1-205ENST00000559886 TRIML1Q8N9V2 468 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 COPS5Q92905 334 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 BHMT2Q9H2M3 363 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 GABBR1Q9UBS5 961 aa13.6□□□□□ -0.23
HERC1-205ENST00000559886 RPN1P04843 607 aaKnown RBP13.59□□□□□ -0.23
HERC1-205ENST00000559886 SSBP05455 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
HERC1-205ENST00000559886 XRCC6P12956 609 aaKnown RBP eCLIP13.59□□□□□ -0.23
HERC1-205ENST00000559886 CYP2C19P33261 490 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 NLRP12P59046 1061 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 PRKCZQ05513 592 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 ATP6V0A1Q93050 837 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 ANO10Q9NW15 660 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 ZHX1Q9UKY1 873 aaPredicted RBP13.59□□□□□ -0.23
HERC1-205ENST00000559886 ARID2Q68CP9 1835 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 KLRC4O43908 158 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 DKC1O60832 514 aaKnown RBP eCLIP13.59□□□□□ -0.23
HERC1-205ENST00000559886 ZNF865P0CJ78 1059 aaPredicted RBP13.59□□□□□ -0.23
HERC1-205ENST00000559886 CYP11B2P19099 503 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 LAMC2Q13753 1193 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 MORC3Q14149 939 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 HSDL1Q3SXM5 330 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 PRAMEF19Q5SWL8 479 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 CD99L2Q8TCZ2 262 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 DDX12PQ92771 950 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 EMID1Q96A84 441 aaPredicted RBP13.59□□□□□ -0.23
HERC1-205ENST00000559886 GPR20Q99678 358 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 DBR1Q9UK59 544 aaKnown RBP13.59□□□□□ -0.23
HERC1-205ENST00000559886 IGSF9BQ9UPX0 1349 aa13.59□□□□□ -0.23
HERC1-205ENST00000559886 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.58□□□□□ -0.23
HERC1-205ENST00000559886 NKRFO15226 690 aaKnown RBP eCLIP13.58□□□□□ -0.23
HERC1-205ENST00000559886 ZNF862O60290 1169 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 GH1P01241 217 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 BMP6P22004 513 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 KCNB1Q14721 858 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 ANO6Q4KMQ2 910 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 ARSHQ5FYA8 562 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 ISM2Q6H9L7 571 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 GPBP1Q86WP2 473 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 DNAJC19Q96DA6 116 aa13.58□□□□□ -0.23
HERC1-205ENST00000559886 SPATA33Q96N06 139 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms