RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 COG5Q9UP83 839 aa21.52■■□□□ 1.04
CDC42BPB-206ENST00000559790 GNAT1P11488 350 aa21.51■■□□□ 1.03
CDC42BPB-206ENST00000559790 SREBF1P36956 1147 aa21.51■■□□□ 1.03
CDC42BPB-206ENST00000559790 TSPYL2Q9H2G4 693 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPB-206ENST00000559790 JPH1Q9HDC5 661 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPB-206ENST00000559790 RBM28Q9NW13 759 aaKnown RBP21.51■■□□□ 1.03
CDC42BPB-206ENST00000559790 ERAP1Q9NZ08 941 aa21.51■■□□□ 1.03
CDC42BPB-206ENST00000559790 NFASCO94856 1347 aa21.51■■□□□ 1.03
CDC42BPB-206ENST00000559790 KLF18A0A0U1RQI7 1052 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 ZBTB43O43298 467 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 CDC45O75419 566 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 CCNE2O96020 404 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 NAPAP54920 295 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 EPC2Q52LR7 807 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 FBXO47Q5MNV8 452 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 TAF2Q6P1X5 1199 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 CRIPAKQ8N1N5 446 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 FBXO22Q8NEZ5 403 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 TRAPPC12Q8WVT3 735 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 KHSRPQ92945 711 aaKnown RBP eCLIP21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 HLA-CQ95604 372 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 AGO3Q9H9G7 860 aaKnown RBP21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 BARHL2Q9NY43 387 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 RAPGEFL1Q9UHV5 662 aa21.5■■□□□ 1.03
CDC42BPB-206ENST00000559790 IGLV3-22A0A075B6J6 115 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 GOLGA8AA7E2F4 631 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 GOLGA8BA8MQT2 603 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 INSRRP14616 1297 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 RCAN1P53805 252 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 ACTR2P61160 394 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 RNF20Q5VTR2 975 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 DNAJB3Q8WWF6 145 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 APBB2Q92870 758 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 AGO4Q9HCK5 861 aaKnown RBP21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 CD320Q9NPF0 282 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 SLC9A2Q9UBY0 812 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 CDY2AQ9Y6F7 541 aa21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 V9GY48 417 aaPredicted RBP21.49■■□□□ 1.03
CDC42BPB-206ENST00000559790 IGKV6D-21A0A0A0MT36 114 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 MEIS1O00470 390 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 MAFGO15525 162 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 ATG7O95352 703 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 ADCY7P51828 1080 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 COL19A1Q14993 1142 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 PLCB4Q15147 1175 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 PKN1Q16512 942 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 AAK1Q2M2I8 961 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 CEP55Q53EZ4 464 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 TEX2Q8IWB9 1127 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 SMARCAD1Q9H4L7 1026 aa21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 UBE2ZQ9H832 354 aaPredicted RBP21.48■■□□□ 1.03
CDC42BPB-206ENST00000559790 FAM86B1E9PN63 330 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 hCG_1984214I3L0E3 225 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 DHX15O43143 795 aaKnown RBP21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 EDIL3O43854 480 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 UPP2O95045 317 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 FAM86B2P0C5J1 330 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 ADD1P35611 737 aaKnown RBP21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 ZNF713Q8N859 430 aaPredicted RBP21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 GLG1Q92896 1179 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 MRPL38Q96DV4 380 aaKnown RBP21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 YME1L1Q96TA2 773 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 AGXT2Q9BYV1 514 aa21.47■■□□□ 1.03
CDC42BPB-206ENST00000559790 ZBTB42B2RXF5 422 aa21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 H3BNC9 293 aa21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 MRPS6P82932 125 aaKnown RBP21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 APOBRQ0VD83 1088 aa21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 RTN4RL1Q86UN2 441 aaPredicted RBP21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 TMEM192Q8IY95 271 aa21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 ZNF689Q96CS4 500 aaPredicted RBP21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 SNX14Q9Y5W7 946 aa21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 ADGRA3Q8IWK6 1321 aa21.46■■□□□ 1.03
CDC42BPB-206ENST00000559790 TRIOO75962 3097 aa21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 HSPA4P34932 840 aa21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 IGBP1P78318 339 aa21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 AP3B2Q13367 1082 aa21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 PFKFB3Q16875 520 aaPredicted RBP21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 TSHZ1Q6ZSZ6 1077 aa21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 CCDC60Q8IWA6 550 aaPredicted RBP21.45■■□□□ 1.02
CDC42BPB-206ENST00000559790 ESYT2A0FGR8 921 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 C5orf67F2Z3F1 127 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 ENPP3O14638 875 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 FOSP01100 380 aaPredicted RBP21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 ATP4AP20648 1035 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 CD52P31358 61 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 NTRK3Q16288 839 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 SYNE3Q6ZMZ3 975 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 NIPA1Q7RTP0 329 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 PLPPR4Q7Z2D5 763 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 IL27Q8NEV9 243 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 SAMD11Q96NU1 681 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 FAM49AQ9H0Q0 323 aaPredicted RBP21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 IGSF9BQ9UPX0 1349 aa21.44■■□□□ 1.02
CDC42BPB-206ENST00000559790 SCG2P13521 617 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 COL9A1P20849 921 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 KRT32Q14532 448 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 ABHD15Q6UXT9 468 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms