RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.44	□□□□□ -0.58
FAM227B-208	ENST00000559573	SAMD3	Q8N6K7	520 aa		11.44	□□□□□ -0.58
FAM227B-208	ENST00000559573	ETNPPL	Q8TBG4	499 aa		11.44	□□□□□ -0.58
FAM227B-208	ENST00000559573	WASF1	Q92558	559 aa		11.44	□□□□□ -0.58
FAM227B-208	ENST00000559573	PPP1R9B	Q96SB3	815 aa		11.44	□□□□□ -0.58
FAM227B-208	ENST00000559573	WDR81	Q562E7	1941 aa		11.44	□□□□□ -0.58
FAM227B-208	ENST00000559573	POTEM	A6NI47	508 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	CTSH	P09668	335 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	CSF2RA	P15509	400 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	C9orf50	Q5SZB4	431 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	KRT25	Q7Z3Z0	450 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	DEFB128	Q7Z7B8	93 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	ZSCAN30	Q86W11	494 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	C7orf31	Q8N865	590 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	SDF4	Q9BRK5	362 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	TSEN34	Q9BSV6	310 aa	Known RBP	11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	EHMT1	Q9H9B1	1298 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	RGL1	Q9NZL6	768 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573		Q9Y3F1	56 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	LOC102724159	A0A0B4J2E5	919 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	NKRF	O15226	690 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	GAS7	O60861	476 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	PPFIA4	O75335	1185 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	F2	P00734	622 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	CLTB	P09497	229 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	SMIM10L2A	P0DMW4	78 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	SMIM10L2B	P0DMW5	78 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	SYT1	P21579	422 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	CCDC173	Q0VFZ6	552 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	CUL4A	Q13619	759 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	PWP2	Q15269	919 aa	Known RBP	11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	PTGIS	Q16647	500 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	RUFY4	Q6ZNE9	571 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	ZNF579	Q8NAF0	562 aa	Known RBP	11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	DHX38	Q92620	1227 aa	Known RBP	11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	GABBR1	Q9UBS5	961 aa		11.43	□□□□□ -0.58
FAM227B-208	ENST00000559573	MYH9	P35579	1960 aa	Known RBP	11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	PP2D1	A8MPX8	630 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	ZNF862	O60290	1169 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	ZEB2	O60315	1214 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	PTMS	P20962	102 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	CIITA	P33076	1130 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	HMGN5	P82970	282 aa	Known RBP	11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	SNX17	Q15036	470 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	NCAPH2	Q6IBW4	605 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	NOSTRIN	Q8IVI9	506 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	SEPT1	Q8WYJ6	367 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	EMID1	Q96A84	441 aa	Predicted RBP	11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	SENP7	Q9BQF6	1050 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	WNT8A	Q9H1J5	351 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	ELP1	O95163	1332 aa		11.42	□□□□□ -0.58
FAM227B-208	ENST00000559573	MARCH6	O60337	910 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	PSMD10	O75832	226 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	STAM2	O75886	525 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	RAG1	P15918	1043 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	IBSP	P21815	317 aa	Predicted RBP	11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	TEC	P42680	631 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	USP11	P51784	963 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	CTTN	Q14247	550 aa	Known RBP	11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	BRDT	Q58F21	947 aa	Predicted RBP	11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	HSCB	Q8IWL3	235 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	CKAP2L	Q8IYA6	745 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	LMBR1	Q8WVP7	490 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	GLT8D2	Q9H1C3	349 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	TRPC6	Q9Y210	931 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	NOD1	Q9Y239	953 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	GINS2	Q9Y248	185 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	TRANK1	O15050	2925 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	DCDC2C	A8MYV0	355 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	CD4	P01730	458 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	INSRR	P14616	1297 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	NKX3-2	P78367	333 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	GRIN1	Q05586	938 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	SAFB	Q15424	915 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	IL17A	Q16552	155 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	TCTN1	Q2MV58	587 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	PLA2G4F	Q68DD2	849 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	XRRA1	Q6P2D8	792 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	KCNV1	Q6PIU1	500 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	ABHD15	Q6UXT9	468 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	VWCE	Q96DN2	955 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	PLIN2	Q99541	437 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	HIPK3	Q9H422	1215 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	BRMS1	Q9HCU9	246 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	POLR3E	Q9NVU0	708 aa		11.41	□□□□□ -0.58
FAM227B-208	ENST00000559573	CSDE1	O75534	798 aa	Known RBP	11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	STAT5B	P51692	787 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	PDE4C	Q08493	712 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	PLCB4	Q15147	1175 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	ZRSR1	Q15695	479 aa	Known RBP	11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	SPECC1	Q5M775	1068 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	MARCH8	Q5T0T0	291 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	PDXDC2P	Q6P474	469 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	C16orf59	Q7L2K0	433 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	OTOP2	Q7RTS6	562 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	ANKRD33	Q7Z3H0	272 aa		11.4	□□□□□ -0.58
FAM227B-208	ENST00000559573	SLC43A3	Q8NBI5	491 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms