RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 RC3H2Q9HBD1 1191 aaKnown RBP14.75□□□□□ -0.05
CASC4-208ENST00000559151 NUDT5Q9UKK9 219 aa14.75□□□□□ -0.05
CASC4-208ENST00000559151 PRAMEF25A6NGN4 478 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 FZD9O00144 591 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 CYBBP04839 570 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 SCAND1P57086 179 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 CATSPEREQ5SY80 951 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 PAQR3Q6TCH7 311 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 ARRDC4Q8NCT1 418 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 CDH19Q9H159 772 aa14.74□□□□□ -0.05
CASC4-208ENST00000559151 RASSF10A6NK89 507 aa14.73□□□□□ -0.05
CASC4-208ENST00000559151 F8W031 263 aaPredicted RBP14.73□□□□□ -0.05
CASC4-208ENST00000559151 LRRC32Q14392 662 aa14.73□□□□□ -0.05
CASC4-208ENST00000559151 TRIM48Q8IWZ4 208 aa14.73□□□□□ -0.05
CASC4-208ENST00000559151 PEX11GQ96HA9 241 aa14.73□□□□□ -0.05
CASC4-208ENST00000559151 KDM1AO60341 852 aa14.72□□□□□ -0.05
CASC4-208ENST00000559151 CD40P25942 277 aa14.72□□□□□ -0.05
CASC4-208ENST00000559151 SDHAP31040 664 aa14.72□□□□□ -0.05
CASC4-208ENST00000559151 PCBP2Q15366 365 aaKnown RBP eCLIP14.72□□□□□ -0.05
CASC4-208ENST00000559151 RGL3Q3MIN7 710 aa14.72□□□□□ -0.05
CASC4-208ENST00000559151 C1orf162Q8NEQ5 155 aaPredicted RBP14.72□□□□□ -0.05
CASC4-208ENST00000559151 ABHD4Q8TB40 342 aa14.72□□□□□ -0.05
CASC4-208ENST00000559151 RTF1Q92541 710 aaKnown RBP14.72□□□□□ -0.05
CASC4-208ENST00000559151 E2F8A0AVK6 867 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 ACOT7O00154 380 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 FOXP2O15409 715 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 TMEM253P0C7T8 217 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 ERVFRD-1P60508 538 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 PDCD1Q15116 288 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 ZZZ3Q8IYH5 903 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 CHPFQ8IZ52 775 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 C16orf92Q96LL3 132 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 DBR1Q9UK59 544 aaKnown RBP14.71□□□□□ -0.05
CASC4-208ENST00000559151 HCFC2Q9Y5Z7 792 aa14.71□□□□□ -0.05
CASC4-208ENST00000559151 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.7□□□□□ -0.06
CASC4-208ENST00000559151 GOLGA8AA7E2F4 631 aa14.7□□□□□ -0.06
CASC4-208ENST00000559151 GOLGA8BA8MQT2 603 aa14.7□□□□□ -0.06
CASC4-208ENST00000559151 NUDT19A8MXV4 375 aa14.7□□□□□ -0.06
CASC4-208ENST00000559151 PGM2L1Q6PCE3 622 aa14.7□□□□□ -0.06
CASC4-208ENST00000559151 PDGFDQ9GZP0 370 aaPredicted RBP14.7□□□□□ -0.06
CASC4-208ENST00000559151 ZNF180Q9UJW8 692 aa14.7□□□□□ -0.06
CASC4-208ENST00000559151 YBX2Q9Y2T7 364 aaKnown RBP14.7□□□□□ -0.06
CASC4-208ENST00000559151 FNTBP49356 437 aa14.69□□□□□ -0.06
CASC4-208ENST00000559151 FRMD7Q6ZUT3 714 aa14.69□□□□□ -0.06
CASC4-208ENST00000559151 LMBR1Q8WVP7 490 aa14.69□□□□□ -0.06
CASC4-208ENST00000559151 FAXDC2Q96IV6 333 aa14.69□□□□□ -0.06
CASC4-208ENST00000559151 C8orf48Q96LL4 319 aa14.69□□□□□ -0.06
CASC4-208ENST00000559151 H2AFYO75367 372 aaKnown RBP14.68□□□□□ -0.06
CASC4-208ENST00000559151 ABLIM3O94929 683 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 MMEP08473 750 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 CCND1P24385 295 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 EPHA7Q15375 998 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 PAN2Q504Q3 1202 aaKnown RBP14.68□□□□□ -0.06
CASC4-208ENST00000559151 TTLL11Q8NHH1 800 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 SLC13A1Q9BZW2 595 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 IP6K2Q9UHH9 426 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 MSRAQ9UJ68 235 aa14.68□□□□□ -0.06
CASC4-208ENST00000559151 LUC7L2Q9Y383 392 aaKnown RBP14.68□□□□□ -0.06
CASC4-208ENST00000559151 RAB3GAP1Q15042 981 aa14.67□□□□□ -0.06
CASC4-208ENST00000559151 ADGRF1Q5T601 910 aa14.67□□□□□ -0.06
CASC4-208ENST00000559151 RPTNQ6XPR3 784 aa14.67□□□□□ -0.06
CASC4-208ENST00000559151 ZNF496Q96IT1 587 aaPredicted RBP14.67□□□□□ -0.06
CASC4-208ENST00000559151 RHOBTB2Q9BYZ6 727 aa14.67□□□□□ -0.06
CASC4-208ENST00000559151 LUC7LQ9NQ29 371 aaKnown RBP14.67□□□□□ -0.06
CASC4-208ENST00000559151 ZSCAN20P17040 1043 aaPredicted RBP14.66□□□□□ -0.06
CASC4-208ENST00000559151 GPR3P46089 330 aa14.66□□□□□ -0.06
CASC4-208ENST00000559151 ASB15Q8WXK1 588 aa14.66□□□□□ -0.06
CASC4-208ENST00000559151 ERCC4Q92889 916 aaPredicted RBP14.66□□□□□ -0.06
CASC4-208ENST00000559151 BCAS3Q9H6U6 928 aa14.66□□□□□ -0.06
CASC4-208ENST00000559151 MKS1Q9NXB0 559 aa14.66□□□□□ -0.06
CASC4-208ENST00000559151 NOB1Q9ULX3 412 aaKnown RBP14.66□□□□□ -0.06
CASC4-208ENST00000559151 ZBTB7AO95365 584 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 CFBP00751 764 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 MPOP05164 745 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 RBP3P10745 1247 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 FAHP16930 419 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 PRR5P85299 388 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 NR1I3Q14994 352 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 FYB2Q5VWT5 728 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 FLAD1Q8NFF5 587 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 SEMA4AQ9H3S1 761 aa14.65□□□□□ -0.06
CASC4-208ENST00000559151 SNUPNO95149 360 aaKnown RBP14.64□□□□□ -0.07
CASC4-208ENST00000559151 AFMP43652 599 aa14.64□□□□□ -0.07
CASC4-208ENST00000559151 PNMA8AQ86V59 439 aaPredicted RBP14.64□□□□□ -0.07
CASC4-208ENST00000559151 MYO1HQ8N1T3 1032 aa14.64□□□□□ -0.07
CASC4-208ENST00000559151 TGFBRAP1Q8WUH2 860 aa14.64□□□□□ -0.07
CASC4-208ENST00000559151 JPH3Q8WXH2 748 aaPredicted RBP14.64□□□□□ -0.07
CASC4-208ENST00000559151 TSPAN17Q96FV3 270 aa14.64□□□□□ -0.07
CASC4-208ENST00000559151 INTS4Q96HW7 963 aaKnown RBP14.64□□□□□ -0.07
CASC4-208ENST00000559151 GBP4Q96PP9 640 aa14.64□□□□□ -0.07
CASC4-208ENST00000559151 CAMKK2Q96RR4 588 aa14.64□□□□□ -0.07
CASC4-208ENST00000559151 GABBR1Q9UBS5 961 aa14.64□□□□□ -0.07
CASC4-208ENST00000559151 PCDHGA12O60330 932 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 HERVK_113P62684 666 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 ABI1Q8IZP0 508 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 KIRREL1Q96J84 757 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 CCDC136Q96JN2 1154 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 CCM2LQ9NUG4 571 aaPredicted RBP14.63□□□□□ -0.07
CASC4-208ENST00000559151 PCDHGA9Q9Y5G4 932 aaKnown RBP14.63□□□□□ -0.07
CASC4-208ENST00000559151 PCDHGA8Q9Y5G5 932 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms