RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	PCDHA10	Q9Y5I2	948 aa		13.98	□□□□□ -0.17
GABPB1-208	ENST00000558970	SCN10A	Q9Y5Y9	1956 aa		13.98	□□□□□ -0.17
GABPB1-208	ENST00000558970		A0A087WWV3	80 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	SPTLC2	O15270	562 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	BMP15	O95972	392 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	SFN	P31947	248 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	PRPH	P41219	470 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	MNX1	P50219	401 aa	Predicted RBP	13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	JAK3	P52333	1124 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	SLC39A14	Q15043	492 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	FAM160B1	Q5W0V3	765 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	LINC00301	Q8NCQ3	95 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	TNPO1	Q92973	898 aa	Known RBP	13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	SPATA32	Q96LK8	384 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	GLT1D1	Q96MS3	346 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	MTG1	Q9BT17	334 aa	Predicted RBP	13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	STARD7	Q9NQZ5	370 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	RGL1	Q9NZL6	768 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	FBXO2	Q9UK22	296 aa	Predicted RBP	13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	CFAP45	Q9UL16	551 aa		13.97	□□□□□ -0.17
GABPB1-208	ENST00000558970	LOXHD1	Q8IVV2	1947 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	TMEM150B	A6NC51	233 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970		H3BRB1	525 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	PPFIA4	O75335	1185 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	YEATS4	O95619	227 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	ME1	P48163	572 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	PSEN2	P49810	448 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	FXR2	P51116	673 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	STAT5B	P51692	787 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	MFSD10	Q14728	455 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	KIAA0753	Q2KHM9	967 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	PDXDC2P	Q6P474	469 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	B3GNT9	Q6UX72	402 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	TPH2	Q8IWU9	490 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	SNX29	Q8TEQ0	813 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	KAT2B	Q92831	832 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	PLIN2	Q99541	437 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	SH2D3A	Q9BRG2	576 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	LXN	Q9BS40	222 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	C16orf70	Q9BSU1	422 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	RAB34	Q9BZG1	259 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	CSRNP2	Q9H175	543 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	TUT1	Q9H6E5	874 aa	Known RBP	13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	C11orf49	Q9H6J7	331 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	ZNF215	Q9UL58	517 aa	Predicted RBP	13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	PHF24	Q9UPV7	400 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	TRPC6	Q9Y210	931 aa		13.96	□□□□□ -0.17
GABPB1-208	ENST00000558970	EMSY	Q7Z589	1322 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	POTEB3	A0JP26	581 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	MOXD2P	A6NHM9	499 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	MED24	O75448	989 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	ATG7	O95352	703 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	CCT6A	P40227	531 aa	Known RBP	13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	IGBP1	P78318	339 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	PRKCE	Q02156	737 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	EPHA7	Q15375	998 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	NBPF20	Q3BBV1	942 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	POTEB	Q6S5H4	581 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	KRI1	Q8N9T8	703 aa	Known RBP	13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	RASSF8	Q8NHQ8	419 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	ERMN	Q8TAM6	284 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	LEO1	Q8WVC0	666 aa	Predicted RBP	13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	TSEN34	Q9BSV6	310 aa	Known RBP	13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	RNPEP	Q9H4A4	650 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	SMARCAD1	Q9H4L7	1026 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	EVPL	Q92817	2033 aa		13.95	□□□□□ -0.18
GABPB1-208	ENST00000558970	IGSF9B	Q9UPX0	1349 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	KPNA6	O60684	536 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	LGR5	O75473	907 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	F2	P00734	622 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	HOXD8	P13378	290 aa	Predicted RBP	13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	FXR1	P51114	621 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	NKX3-2	P78367	333 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	ITGA7	Q13683	1181 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	PLCB4	Q15147	1175 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	ATL3	Q6DD88	541 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	POTEG	Q6S5H5	508 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	USP49	Q70CQ1	688 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	NECAB2	Q7Z6G3	386 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	IGSF22	Q8N9C0	903 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	ANKLE1	Q8NAG6	615 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	TRAPPC12	Q8WVT3	735 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	ZBTB10	Q96DT7	871 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	EPSTI1	Q96J88	318 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	ERAP1	Q9NZ08	941 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	PCDHA7	Q9UN72	937 aa		13.94	□□□□□ -0.18
GABPB1-208	ENST00000558970	CEP290	O15078	2479 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	IGKV6D-21	A0A0A0MT36	114 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	ZBTB39	O15060	712 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	ZNF862	O60290	1169 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	PPP6R2	O75170	966 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	P4HB	P07237	508 aa	Known RBP	13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	SMIM10L2A	P0DMW4	78 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	SMIM10L2B	P0DMW5	78 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	ATP4A	P20648	1035 aa		13.93	□□□□□ -0.18
GABPB1-208	ENST00000558970	QARS	P47897	775 aa	Known RBP	13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms